HHsearch alignment for GI: 254780879 and conserved domain: COG0739

>COG0739 NlpD Membrane proteins related to metalloendopeptidases [Cell envelope biogenesis, outer membrane].
Probab=100.00  E-value=1.4e-45  Score=339.58  Aligned_cols=141  Identities=47%  Similarity=0.860  Sum_probs=131.8

Q ss_pred             CCCCCCCCHHHCCCCCCCC--CCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCEEECCCCEEEEEEEEC-CCCCEEEE
Q ss_conf             3355661000001123334--54102356764143404434642003026796727971596799965308-97007999
Q gi|254780879|r  473 YFNENGKSSRPFLLRTPVP--FGRMTSGFGMRYHPILGYSRMHTGVDWAAPRGTPIVAVGDGIVEKANWAG-GYGKQTLI  549 (652)
Q Consensus       473 yyd~~G~S~~k~llr~Pv~--~~risS~Fg~R~hPilg~~r~H~GVD~aAp~GTPI~Aag~G~V~~ag~~~-GyGn~V~I  549 (652)
T Consensus       121 ~~~~~~~~~~~~~~~~p~~~~~~~i~s~fg~r~~p~~~~~~~h~GiD~aa~~gtpV~A~~~G~V~~~~~~~~~yGn~v~i  200 (277)
T COG0739         121 AYDVGGKLLELFGLRWPLPNGKGKISSGFGRRIHPVTGRLEPHKGIDIAAPEGTPVYAAADGVVVFAGNGGWGYGNLVII  200 (277)
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCEECCCCCCEEEECCCEEEEEECCCCCCCCEEEEE
T ss_conf             11335442112000056667786386567765355556546778805026899867851681899970476667708999


Q ss_pred             ECCCCEEEEEHHHHHHHHCCCCCCEEECCCEEEEECCCCCCCCCEEEEEEEECCE---ECCCCEECCCCC
Q ss_conf             8399748820021445411889978834958998416678887426889978678---836620007887
Q gi|254780879|r  550 HHGNGYVSSYNHQDAIAKNIKAGTAVKQGQIIGWIGTTGLSTGPHLHYELIVNGI---KVDSTKVRIPER  616 (652)
Q Consensus       550 ~H~~Gy~T~YaHlS~~a~gV~~G~~V~qGQvIG~vGsTG~STGPHLHfEv~vnG~---~VdP~~~~lp~~  616 (652)
T Consensus       201 ~H~~g~~t~Y~Hl~~~~--V~~G~~V~~G~~Ig~~G~tG~stgphLHfev~~~g~~~~~~~p~~~-l~~~  267 (277)
T COG0739         201 KHGDGYVTVYAHLSSIL--VKEGQKVKAGQVIGYVGSTGRSTGPHLHFEVRKNGKLVPPVNPARY-LPKG  267 (277)
T ss_pred             ECCCCEEEEEECCCCCC--CCCCCEEECCCEEEECCCCCCCCCCEEEEEEEECCCCCCCCCHHHH-CCCC
T ss_conf             74896588996065013--1589788469789972576775797588988758703675785562-2444