HHsearch alignment for GI: 254780879 and conserved domain: COG2190

>COG2190 NagE Phosphotransferase system IIA components [Carbohydrate transport and metabolism].
Probab=90.43  E-value=1.2  Score=23.51  Aligned_cols=78  Identities=24%  Similarity=0.275  Sum_probs=53.4

Q ss_pred             CCCCCCCCCCCEEECCCCCCCEEECCCCEEEEE-------EEECCCCCEEEEECCCCEEEEEHHHHHHHHCCCCCCEEEC
Q ss_conf             340443464200302679672797159679996-------5308970079998399748820021445411889978834
Q gi|254780879|r  505 PILGYSRMHTGVDWAAPRGTPIVAVGDGIVEKA-------NWAGGYGKQTLIHHGNGYVSSYNHQDAIAKNIKAGTAVKQ  577 (652)
Q Consensus       505 Pilg~~r~H~GVD~aAp~GTPI~Aag~G~V~~a-------g~~~GyGn~V~I~H~~Gy~T~YaHlS~~a~gV~~G~~V~q  577 (652)
T Consensus        25 ~vFs~k~mGdGiAI~-P~~g~vvAPvdG~v~~iFpTkHAigi~t~~GvEiLi-Hi-GiDTV~L~GegF~~~v~~Gd~Vk~  101 (156)
T COG2190          25 PVFSEKMVGDGVAIK-PSEGEVVAPVDGTVVLIFPTKHAIGIETDEGVEILI-HI-GIDTVKLNGEGFESLVKEGDKVKA  101 (156)
T ss_pred             HHHHCCCCCCCEEEE-CCCCEEEECCCCEEEEEEECCCEEEEECCCCCEEEE-EE-CEEEEEECCCCEEEEEECCCEECC
T ss_conf             676415634867994-689959812685899985178479998389959999-95-640586889324787507998815


Q ss_pred             CCEEEEEC
Q ss_conf             95899841
Q gi|254780879|r  578 GQIIGWIG  585 (652)
Q Consensus       578 GQvIG~vG  585 (652)
T Consensus       102 Gd~Li~fD  109 (156)
T COG2190         102 GDPLLEFD  109 (156)
T ss_pred             CCEEEEEC
T ss_conf             98989997