HHsearch alignment for GI: 254780879 and conserved domain: COG3061

>COG3061 OapA Cell envelope opacity-associated protein A [Cell envelope biogenesis, outer membrane].
Probab=98.02  E-value=0.00017  Score=50.45  Aligned_cols=83  Identities=8%  Similarity=0.134  Sum_probs=70.7

Q ss_pred             CEEEEEECCCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHCCCCCEEEEEECCCCCCCEEEEEEECCCCCEEEEEEEC
Q ss_conf             01368841797089999974999899999999854015610169988899997278886405899971688348999842
Q gi|254780879|r  275 ADDLIPIQHNTTIFDAMVHAGYSNGDSAKIAKALKNEVRVDQLTKDEILRIGVVQKDDKFTIVRFSIYHKQKHLLTIALN  354 (652)
Q Consensus       275 ~e~~v~VK~GDTL~~IL~r~Gvs~~ei~~i~~al~~~~~~~~Lr~Gq~L~I~~~~~~~~~~~~r~si~~~~~~~~~va~~  354 (652)
T Consensus       158 ~wqsy~V~~G~TLaQlFRdn~LpitDVnAMakveGagkpLSnlkaGq~Vki~~naqG---~Vt~L~le~~n~-~vlF~RQ  233 (242)
T COG3061         158 NWQSYTVPQGKTLAQLFRDNNLPITDVNAMAKVEGAGKPLSNLKAGQKVKISLNAQG---RVTELRLETGNN-QVLFTRQ  233 (242)
T ss_pred             CCEEEEECCCCCHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHCCCCCEEEEEECCCC---CEEEEEECCCCC-EEEEEEC
T ss_conf             651587168765999876069985776787753047870222147777999974766---457899616985-4889972


Q ss_pred             CCCCEEE
Q ss_conf             7884320
Q gi|254780879|r  355 DNNEYVL  361 (652)
Q Consensus       355 d~g~fv~  361 (652)
T Consensus       234 ~DGSy~r  240 (242)
T COG3061         234 SDGSYIR  240 (242)
T ss_pred             CCCCCCC
T ss_conf             7886222