HHsearch alignment for GI: 254780879 and conserved domain: COG3061
>COG3061 OapA Cell envelope opacity-associated protein A [Cell envelope biogenesis, outer membrane].
Probab=98.02 E-value=0.00017 Score=50.45 Aligned_cols=83 Identities=8% Similarity=0.134 Sum_probs=70.7
Q ss_pred CEEEEEECCCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHCCCCCEEEEEECCCCCCCEEEEEEECCCCCEEEEEEEC
Q ss_conf 01368841797089999974999899999999854015610169988899997278886405899971688348999842
Q gi|254780879|r 275 ADDLIPIQHNTTIFDAMVHAGYSNGDSAKIAKALKNEVRVDQLTKDEILRIGVVQKDDKFTIVRFSIYHKQKHLLTIALN 354 (652)
Q Consensus 275 ~e~~v~VK~GDTL~~IL~r~Gvs~~ei~~i~~al~~~~~~~~Lr~Gq~L~I~~~~~~~~~~~~r~si~~~~~~~~~va~~ 354 (652)
T Consensus 158 ~wqsy~V~~G~TLaQlFRdn~LpitDVnAMakveGagkpLSnlkaGq~Vki~~naqG---~Vt~L~le~~n~-~vlF~RQ 233 (242)
T COG3061 158 NWQSYTVPQGKTLAQLFRDNNLPITDVNAMAKVEGAGKPLSNLKAGQKVKISLNAQG---RVTELRLETGNN-QVLFTRQ 233 (242)
T ss_pred CCEEEEECCCCCHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHCCCCCEEEEEECCCC---CEEEEEECCCCC-EEEEEEC
T ss_conf 651587168765999876069985776787753047870222147777999974766---457899616985-4889972
Q ss_pred CCCCEEE
Q ss_conf 7884320
Q gi|254780879|r 355 DNNEYVL 361 (652)
Q Consensus 355 d~g~fv~ 361 (652)
T Consensus 234 ~DGSy~r 240 (242)
T COG3061 234 SDGSYIR 240 (242)
T ss_pred CCCCCCC
T ss_conf 7886222