HHsearch alignment for GI: 254780879 and conserved domain: PRK10255
>PRK10255 N-acetyl glucosamine specific PTS system components IIABC; Provisional.
Probab=90.54 E-value=1.2 Score=23.35 Aligned_cols=85 Identities=18% Similarity=0.200 Sum_probs=56.3
Q ss_pred CCCCCCCCCCCCEEECCCCCCCEEECCCCEEEEEEEE-------CCCCCEEEEECCCCEEEEEHHHHHHHHCCCCCCEEE
Q ss_conf 4340443464200302679672797159679996530-------897007999839974882002144541188997883
Q gi|254780879|r 504 HPILGYSRMHTGVDWAAPRGTPIVAVGDGIVEKANWA-------GGYGKQTLIHHGNGYVSSYNHQDAIAKNIKAGTAVK 576 (652)
Q Consensus 504 hPilg~~r~H~GVD~aAp~GTPI~Aag~G~V~~ag~~-------~GyGn~V~I~H~~Gy~T~YaHlS~~a~gV~~G~~V~ 576 (652)
T Consensus 517 D~vFa~~~mG~G~aI~-P~~g~v~aP~dG~i~~vf~T~HA~gi~~~~G~EiLi-Hi-GiDTV~L~G~gF~~~v~~Gd~Vk 593 (648)
T PRK10255 517 DEAFASKAVGDGVAVK-PTDKIVVSPAAGTIVKIFNTNHAFCLETEKGAEIVV-HM-GIDTVALEGKGFKRLVEEGAQVS 593 (648)
T ss_pred CHHHHHCCCCCCEEEE-CCCCEEECCCCCEEEEECCCCCEEEEECCCCCEEEE-EE-EECCEEECCCCCEEEECCCCEEC
T ss_conf 7555314557856994-589959806885799971688579998489818999-95-44524217805348834859967
Q ss_pred CCCEEEEEC-----CCCCCC
Q ss_conf 495899841-----667888
Q gi|254780879|r 577 QGQIIGWIG-----TTGLST 591 (652)
Q Consensus 577 qGQvIG~vG-----sTG~ST 591 (652)
T Consensus 594 ~G~~l~~~D~~~i~~~g~~~ 613 (648)
T PRK10255 594 AGQPILEMDLDYLNANARSM 613 (648)
T ss_pred CCCEEEEECHHHHHHCCCCC
T ss_conf 99988997499998509998