HHsearch alignment for GI: 254780879 and conserved domain: TIGR02907
>TIGR02907 spore_VI_D stage VI sporulation protein D; InterPro: IPR014256 This entry represents SpoVID, the stage VI sporulation protein D, which is restricted to endospore-forming bacteria, all of which are found among the Firmicutes. It is widely distributed but not quite universal in this group. Between well-conserved N-terminal and C-terminal domains is a poorly conserved, low-complexity region of variable length, rich in glutamic acid. SpoVID is involved in spore coat assembly in the mother cell compartment late in the process of sporulation..
Probab=95.55 E-value=0.015 Score=36.79 Aligned_cols=70 Identities=14% Similarity=0.070 Sum_probs=49.7
Q ss_pred CCCCCCCCCCCCCCCCCCCCC-CCEEEEEECCCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHCCCCCEEEEE
Q ss_conf 122334222665445677776-40136884179708999997499989999999985401561016998889999
Q gi|254780879|r 253 KIIEENRTITSPQVLIDKIPE-FADDLIPIQHNTTIFDAMVHAGYSNGDSAKIAKALKNEVRVDQLTKDEILRIG 326 (652)
Q Consensus 253 ~~~~en~t~~~~~~~~~~~~~-~~e~~v~VK~GDTL~~IL~r~Gvs~~ei~~i~~al~~~~~~~~Lr~Gq~L~I~ 326 (652)
T Consensus 301 ~~r~Ena~YLt~lf~~~eeE~FTKlk~civQe~dtle~IA~RY~~S~~qL~r~----N~leSD~~v~~GQlLYIP 371 (371)
T TIGR02907 301 KEREENALYLTKLFAKEEEEEFTKLKMCIVQEGDTLETIAERYEVSVSQLLRV----NQLESDEEVNEGQLLYIP 371 (371)
T ss_pred CCCCCHHHHHHHHHHCCCCCCCCCEEEEEEECCCCHHHHHHHHCCCHHHHHHH----CCCCCCHHHCCCCEEECC
T ss_conf 78760255777875048432100038889852886554540212586887520----365572335175145219