HHsearch results for GI: 254780879 and protein with PDBid: 1ci3_M

>1ci3_M Protein (cytochrome F); electron transfer protein, complex subunit, electron transport; HET: HEM; 1.90A {Phormidium laminosum} SCOP: b.2.6.1 b.84.2.2 PDB: 1tu2_B*

Probab=92.75  E-value=0.12  Score=28.92  Aligned_cols=62  Identities=13%  Similarity=0.115  Sum_probs=47.8

Q ss_pred             CCCCCCEEECCCCEEEEEEEECCCCCEEEEECCCCEEEEEHHHHHHHHCCCCCCEEECCCEE
Q ss_conf             67967279715967999653089700799983997488200214454118899788349589
Q gi|254780879|r  520 APRGTPIVAVGDGIVEKANWAGGYGKQTLIHHGNGYVSSYNHQDAIAKNIKAGTAVKQGQII  581 (652)
Q Consensus       520 Ap~GTPI~Aag~G~V~~ag~~~GyGn~V~I~H~~Gy~T~YaHlS~~a~gV~~G~~V~qGQvI  581 (652)
                      -|--+.+.|..+|+|........-++.|.|.-.+|-...|.=-..-.--|+.|+.|+.||.+
T Consensus       166 KsNN~a~~AevsG~Vs~I~~~ekG~~~I~I~t~dGe~v~y~IP~G~~L~V~eGd~VkaGq~L  227 (249)
T 1ci3_M          166 KSNNAVYNASAAGVITAIAKADDGSAEVKIRTEDGTTIVDKIPAGPELIVSEGEEVAAGAAL  227 (249)
T ss_dssp             BCSSSCCBCSSCEEEEEEEECTTSCEEEEEECTTSCEEEEEECSSSCBCCCTTCEECTTCBS
T ss_pred             CCCCCEEECCCCEEEEEEEECCCCCEEEEEECCCCCEEEEECCCCCEEEECCCCEEECCCCC
T ss_conf             57885076436759988487279988999989999799997699981577789998089842