HHSEARCH alignment of GI: 254780879 and SCOP domain: d1ci3m2

Alignment

Probab=93.53  E-value=0.034  Score=31.06  Aligned_cols=54  Identities=15%  Similarity=0.152  Sum_probs=41.5

Q ss_pred             ECCCCEEEEEEEECCCCCEEEEECCCCEEEEEHHHHHHHHCCCCCCEEECCCEE
Q ss_conf             715967999653089700799983997488200214454118899788349589
Q gi|254780879|r  528 AVGDGIVEKANWAGGYGKQTLIHHGNGYVSSYNHQDAIAKNIKAGTAVKQGQII  581 (652)
Q Consensus       528 Aag~G~V~~ag~~~GyGn~V~I~H~~Gy~T~YaHlS~~a~gV~~G~~V~qGQvI  581 (652)
                      |..+|+|...+....-++.|.|...+|-...|.=-....--|+.|+.|+.||.+
T Consensus         5 A~~~G~V~~i~~~~~g~~~I~I~~~~G~~~~y~Ip~g~~l~V~eGd~V~aG~~L   58 (62)
T d1ci3m2           5 ASAAGVITAIAKADDGSAEVKIRTEDGTTIVDKIPAGPELIVSEGEEVAAGAAL   58 (62)
T ss_dssp             CSSCEEEEEEEECTTSCEEEEEECTTSCEEEEEECSSSCBCCCTTCEECTTCBS
T ss_pred             CCCCEEEEEEEECCCCCEEEEEECCCCCEEEEECCCCCEEEECCCCEEECCCCC
T ss_conf             710879989586269988999999999899998689998788799999589714

SCOP domain information

class: All beta proteins
fold: Barrel-sandwich hybrid
superfamily: Rudiment single hybrid motif
family: Cytochrome f, small domain
domain: Cytochrome f, small domain
species: Phormidium laminosum [TaxId: 32059]