HHSEARCH alignment of GI: 254780879 and SCOP domain: d1gpra_

Alignment
>d1gpra_ b.84.3.1 (A:) Glucose permease IIa domain, IIa-glc {Bacillus subtilis [TaxId: 1423]}
Probab=94.95  E-value=0.022  Score=32.44  Aligned_cols=83  Identities=13%  Similarity=0.075  Sum_probs=58.4

Q ss_pred             CCCCCCCCCCCEEECCCCCCCEEECCCCEEEEEEEECCCCCEEEEECCCC--------EEEEEHHHHHHHHCCCCCCEEE
Q ss_conf             34044346420030267967279715967999653089700799983997--------4882002144541188997883
Q gi|254780879|r  505 PILGYSRMHTGVDWAAPRGTPIVAVGDGIVEKANWAGGYGKQTLIHHGNG--------YVSSYNHQDAIAKNIKAGTAVK  576 (652)
Q Consensus       505 Pilg~~r~H~GVD~aAp~GTPI~Aag~G~V~~ag~~~GyGn~V~I~H~~G--------y~T~YaHlS~~a~gV~~G~~V~  576 (652)
                      |++-..-|=.|+-+- |.+--|+|..+|+|...--   -+..+-|+..||        ..|.-.+-..|..-|+.||+|+
T Consensus        29 ~vFs~~~~G~G~aI~-P~~~~v~AP~~G~I~~i~~---T~HAigi~t~~G~evLiHiGiDTV~L~G~gF~~~v~~Gd~Vk  104 (158)
T d1gpra_          29 QVFSGKMMGDGFAIL-PSEGIVVSPVRGKILNVFP---TKHAIGLQSDGGREILIHFGIDTVSLKGEGFTSFVSEGDRVE  104 (158)
T ss_dssp             HHHHTTSSCEEEEEE-ESSCEEECSSSEEEEEECT---TSSEEEEEETTSCEEEEECSBSCGGGTTTTEEECCCTTCEEC
T ss_pred             HHHCCCCCCCEEEEE-ECCCEEEEEECEEEEEECC---CCCEEEEEECCCEEEEEEEEECCCCCCCCCEEEEECCCCEEC
T ss_conf             475557833649999-7399899820859999837---997999994897299999800520148960699986899996


Q ss_pred             CCCEEEEECC-----CCCCC
Q ss_conf             4958998416-----67888
Q gi|254780879|r  577 QGQIIGWIGT-----TGLST  591 (652)
Q Consensus       577 qGQvIG~vGs-----TG~ST  591 (652)
                      +||.|..+=.     -|+++
T Consensus       105 ~G~~L~~~D~~~i~~~g~~~  124 (158)
T d1gpra_         105 PGQKLLEVDLDAVKPNVPSL  124 (158)
T ss_dssp             TTCEEEEECHHHHGGGSSBC
T ss_pred             CCCEEEEECHHHHHHHCCCC
T ss_conf             89897775899999609997


SCOP domain information

class: All beta proteins
fold: Barrel-sandwich hybrid
superfamily: Duplicated hybrid motif
family: Glucose permease-like
domain: Glucose permease IIa domain, IIa-glc
species: Bacillus subtilis [TaxId: 1423]