HHSEARCH alignment of GI: 254780879 and SCOP domain: d2gpra_

Alignment

Probab=94.00  E-value=0.045  Score=30.21  Aligned_cols=83  Identities=12%  Similarity=0.057  Sum_probs=57.0

Q ss_pred             CCCCCCCCCCCEEECCCCCCCEEECCCCEEEEEEEECCCCCEEEEECCCC--------EEEEEHHHHHHHHCCCCCCEEE
Q ss_conf             34044346420030267967279715967999653089700799983997--------4882002144541188997883
Q gi|254780879|r  505 PILGYSRMHTGVDWAAPRGTPIVAVGDGIVEKANWAGGYGKQTLIHHGNG--------YVSSYNHQDAIAKNIKAGTAVK  576 (652)
Q Consensus       505 Pilg~~r~H~GVD~aAp~GTPI~Aag~G~V~~ag~~~GyGn~V~I~H~~G--------y~T~YaHlS~~a~gV~~G~~V~  576 (652)
                      |++-..-|=.|+-+- |.+--|+|.-||+|...-.   -+..+-|+..+|        ..|.-.+-..|-.-|++||+|+
T Consensus        27 ~vFs~k~~G~G~aI~-P~~~~v~AP~dG~I~~i~~---T~HAigi~t~~G~eiLIHiGidTV~L~G~gF~~~v~~Gd~V~  102 (154)
T d2gpra_          27 EVFKERMLGDGFAIN-PKSNDFHAPVSGKLVTAFP---TKHAFGIQTKSGVEILLHIGLDTVSLDGNGFESFVTQDQEVN  102 (154)
T ss_dssp             HHHHTTSSCEEEEEE-ESSSEEECSSCEEEEECCT---TCSEEEEECTTSCEEEEECSSSGGGGTTCSEEECCCTTCEEC
T ss_pred             HHHCCCCCCCEEEEE-ECCCEEEEECCEEEEEECC---CCCEEEEEECCCCEEEEEECCCCCCCCCCEEEEEECCCCEEC
T ss_conf             565568973769999-6599799853809999877---896999991899899999763610158832689954899990


Q ss_pred             CCCEEEEEC-----CCCCCC
Q ss_conf             495899841-----667888
Q gi|254780879|r  577 QGQIIGWIG-----TTGLST  591 (652)
Q Consensus       577 qGQvIG~vG-----sTG~ST  591 (652)
                      +||.+..+=     .-|+++
T Consensus       103 ~G~~L~~~D~~~i~~~g~~~  122 (154)
T d2gpra_         103 AGDKLVTVDLKSVAKKVPSI  122 (154)
T ss_dssp             TTCEEEEECHHHHHHHSSCC
T ss_pred             CCCEEEEECHHHHHHCCCCC
T ss_conf             89999998599998639998

SCOP domain information

class: All beta proteins
fold: Barrel-sandwich hybrid
superfamily: Duplicated hybrid motif
family: Glucose permease-like
domain: Glucose permease IIa domain, IIa-glc
species: Mycoplasma capricolum [TaxId: 2095]