RPS-BLAST 2.2.22 [Sep-27-2009]

Database: CddB 
           21,608 sequences; 5,994,473 total letters

Searching..................................................done

Query= gi|254780880|ref|YP_003065293.1| hypothetical protein
CLIBASIA_03885 [Candidatus Liberibacter asiaticus str. psy62]
         (40 letters)



>gnl|CDD|178764 PLN03225, PLN03225, Serine/threonine-protein kinase SNT7;
           Provisional.
          Length = 566

 Score = 24.4 bits (53), Expect = 6.1
 Identities = 7/20 (35%), Positives = 10/20 (50%), Gaps = 2/20 (10%)

Query: 2   TIDNESNQ--ARKGIWWMPW 19
           T+D       A+K +WW  W
Sbjct: 542 TVDEIPGGQGAKKSVWWNRW 561


  Database: CddB
    Posted date:  Feb 4, 2011  9:54 PM
  Number of letters in database: 5,994,473
  Number of sequences in database:  21,608
  
Lambda     K      H
   0.322    0.130    0.500 

Gapped
Lambda     K      H
   0.267   0.0749    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 21608
Number of Hits to DB: 593,900
Number of extensions: 16602
Number of successful extensions: 27
Number of sequences better than 10.0: 1
Number of HSP's gapped: 27
Number of HSP's successfully gapped: 2
Length of query: 40
Length of database: 5,994,473
Length adjustment: 14
Effective length of query: 26
Effective length of database: 5,691,961
Effective search space: 147990986
Effective search space used: 147990986
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 50 (23.0 bits)