HHsearch alignment for GI: 254780882 and conserved domain: cd01185

>cd01185 INT_Tn4399 Tn4399 and related integrases, DNA breaking-rejoining enzymes, integrase/recombinases, N- and C-terminal domains. This CD includes various bacterial integrases, including cLV25, a Bacteroides fragilis chromosomal transfer factor integrase similar to the Bacteroides mobilizable transposon, Tn4399, integrase.
Probab=95.02  E-value=0.067  Score=31.16  Aligned_cols=39  Identities=18%  Similarity=0.023  Sum_probs=33.2

Q ss_pred             HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf             999999999998625488999999999999999998512
Q gi|254780882|r   16 KERQNWLQNLEIERGLSKLTLQSYECDTRQFLIFLAFYT   54 (328)
Q Consensus        16 ~~~e~~L~~l~~~r~~s~~T~~~Y~~~l~~f~~~~~~~~   54 (328)
T Consensus        69 ~~i~~f~~~L~~~k~~s~~Ti~~~l~~lr~~~~~a~~~~  107 (299)
T cd01185          69 EFILEFKLFLRKEKKLSRNTAVHYLSWLKKLLKIAYRDK  107 (299)
T ss_pred             HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCC
T ss_conf             999999999987579888899999999999999999889