HHsearch alignment of GI: 254780882 and MMDB domain: 1a0p_A_101-290
>1a0p_A (A:101-290) Site-specific recombinase XERD; DNA binding, DNA recombination; 2.50A {Escherichia coli}
Probab=99.96 E-value=3.3e-30 Score=207.57 Aligned_cols=186 Identities=35% Similarity=0.434 Sum_probs=125.6
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCC
Q ss_conf 22221211111110156787765310135677577532012221001123322222112222233232203323785310
Q gi|254780882|r 119 LKKSNSLPRALNEKQALTLVDNVLLHTSHETKWIDARNSAILYLLYGCGLRISEALSLTPQNIMDDQSTLRIQGKGDKIR 198 (328)
Q Consensus 119 ~k~~~~~p~~lt~~e~~~ll~~~~~~~~~~~~~~~~Rd~~i~~ll~~TGlR~~El~~L~~~did~~~~~i~v~gKg~K~R 198 (328)
||.+++.|++++.+|+.++++++.. ......||++||.+++.||||+||+++|+|+||+++.+.+.|..++.+..
T Consensus 1 PK~~~~~~~~lt~eel~~ll~~~~~-----~~~~~~r~~~i~~l~~~TGlR~~Ei~~L~~~di~~~~~~i~i~~~~~~~~ 75 (190)
T 1a0p_A 1 PKLPQRLPKDLSEAQVERLLQAPLI-----DQPLELRDKAMLEVLYATGLRVSELVGLTMSDISLRQGVVRVIGKGNKER 75 (190)
T ss_dssp --------CCCCHHHHHHHHHCSCT-----TSHHHHHHHHHHHHHHHHCCCHHHHTTCBGGGEETTTTEEEEECSSSCEE
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCC-----HHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHCCCCCCEEEECCCCCCCC
T ss_conf 6411023222222222222222210-----11336899999998656412045540584999054232899668898201
Q ss_pred CCCCCCCCHHHHHHHHHHHCCC-CCCCCCCCCCCCCCCCCCCCCCHHHHHH-HHHHHCCCCCCCCCCCCHHHHHHHHHHC
Q ss_conf 0011221002343221110012-3446655432111122111000123567-8999768699988054179999999984
Q gi|254780882|r 199 IVPLLPSVRKAILEYYDLCPFD-LNLNIQLPLFRGIRGKPLNPGVFQRYIR-QLRRYLGLPLSTTAHTLRHSFATHLLSN 276 (328)
Q Consensus 199 ~Vpi~~~~~~~l~~yl~~~~~~-~~~~~~~~lF~~~~g~~ls~~~i~~~~~-~~~~~~gi~~~~spH~lRHtfAt~ll~~ 276 (328)
..+...........+....... .......+.+......+........... ......+...++++|++||||||.++++
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~Rht~~t~~~~~ 155 (190)
T 1a0p_A 76 LVPLGEEAVYWLETYLEHGRPWLLNGVSIDVLFPSQRAQQMTRQTFWHRIKHYAVLAGIDSEKLSPHVLRHAFATHLLNH 155 (190)
T ss_dssp EEECCHHHHHHHHHHHHHTHHHHHTTCCCCBSSBCTTSSBCCHHHHHHHHHHHHHHTTCCGGGCCHHHHHHHHHHHHHHH
T ss_pred CCEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHC
T ss_conf 01001110035677776520211223456554432222321117899999999999468999877651889999999987
Q ss_pred CCCHHHHHHHHCCCCHHHHHHHHHHCHHHHHHH
Q ss_conf 899889999837888789799996198999999
Q gi|254780882|r 277 GGDLRSIQSILGHFRLSTTQIYTNVNSKNGGDW 309 (328)
Q Consensus 277 G~~~~~v~~~lGH~s~~tT~~Y~h~~~~~~~~~ 309 (328)
|+|+..||++|||+|++||++|+|++++..+++
T Consensus 156 ~~~~~~i~~~lGH~s~~~T~~Y~~~~~~~~~~a 188 (190)
T 1a0p_A 156 GADLRVVQMLLGHSDLSTTQIYTHVATERLRQL 188 (190)
T ss_dssp CSSCGGGSSCC--CCCCHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHCCCCHHHHHHHHCCCHHHHHHH
T ss_conf 899999998818998899999977899999986