HHsearch alignment of GI: 254780882 and MMDB domain: 1z1b_A_75-166
>1z1b_A (A:75-166) Integrase; protein-DNA complex, DNA binding protein/DNA complex; HET: PTR; 3.80A {Enterobacteria phage lambda}
Probab=99.33 E-value=6.2e-12 Score=93.46 Aligned_cols=92 Identities=16% Similarity=0.113 Sum_probs=81.8
Q ss_pred HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999862548899999999999999999851214788789689899999999999986121013321123
Q gi|254780882|r 13 ELLKERQNWLQNLEIERGLSKLTLQSYECDTRQFLIFLAFYTEEKITIQTIRQLSYTEIRAFISKRRTQKIGDRSLKRSL 92 (328)
Q Consensus 13 ~l~~~~e~~L~~l~~~r~~s~~T~~~Y~~~l~~f~~~~~~~~~~~~~~~~~~~i~~~~i~~~l~~l~~~~~s~~T~~~~l 92 (328)
++.+.+++|+++++. ++.|++|+..|+..++.|..+++ ..++.+|++.+++.|+..+.+. .+++|+++.+
T Consensus 1 T~~~~~~~~~~~~~~-~~~s~~T~~~y~~~~~~~~~~~g--------~~~i~~i~~~~i~~~~~~~~~~-~s~~t~~~~~ 70 (92)
T 1z1b_A 1 TLHSWLDRYEKILAS-RGIKQKTLINYMSKIKAIRRGLP--------DAPLEDITTKEIAAMLNGYIDE-GKAASAKLIR 70 (92)
T ss_dssp BHHHHHHHHHHHHHT-TTCCHHHHHHHHHHHHHHHHHSC--------SCBGGGCCHHHHHHHHHHHHHT-TCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHC--------CCCHHHCCHHHHHHHHHHHHHC-CCHHHHHHHH
T ss_conf 299999999999864-57888799999999999999976--------8987881299999999999851-3799999999
Q ss_pred HHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 4442222333210123222222
Q gi|254780882|r 93 SGIKSFLKYLKKRKITTESNIL 114 (328)
Q Consensus 93 s~lr~f~~~~~~~~~i~~np~~ 114 (328)
++|++||+||+.+|++..||+.
T Consensus 71 ~~l~~~~~~av~~~~i~~NP~a 92 (92)
T 1z1b_A 71 STLSDAFREAIAEGHITTNHVA 92 (92)
T ss_dssp HHHHHHHHHHHHTTSCSSCTTT
T ss_pred HHHHHHHHHHHHCCCCCCCCCC
T ss_conf 9976656421100123332222