HHsearch results for GI: 254780882 and protein with PDBid: 1xo0_A

>1xo0_A Recombinase CRE; CRE recombinase, holliday junction, recombination,complex (recombinase/DNA), hydrolase, ligase/DNA complex; 2.00A {Enterobacteria phage P1} SCOP: a.60.9.1 d.163.1.1 PDB: 3crx_A* 1kbu_A 1ma7_A 1q3u_A* 1q3v_A* 3mgv_A* 1ouq_A* 1nzb_A* 2crx_A* 1xns_A 5crx_A* 1f44_A* 2hof_A 2hoi_A 4crx_A* 1drg_A 3c29_A* 3c28_A 1crx_A* 1pvr_A ...
Probab=100.00  E-value=5.3e-41  Score=274.07  Aligned_cols=290  Identities=11%  Similarity=0.098  Sum_probs=212.3

Q ss_pred             HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             99999999999862548899999999999999999851214788789689899999999999986121013321123444
Q gi|254780882|r   16 KERQNWLQNLEIERGLSKLTLQSYECDTRQFLIFLAFYTEEKITIQTIRQLSYTEIRAFISKRRTQKIGDRSLKRSLSGI   95 (328)
Q Consensus        16 ~~~e~~L~~l~~~r~~s~~T~~~Y~~~l~~f~~~~~~~~~~~~~~~~~~~i~~~~i~~~l~~l~~~~~s~~T~~~~ls~l   95 (328)
                      +..+.++++++..+++|++|+++|...++.|..||......      +.++++.+|.+|+.++..+|++++|+++++++|
T Consensus         3 ~~~~~~~~~~~~~~~~s~~T~~~y~~~~~~f~~f~~~~~~~------~~~it~~~v~~y~~~l~~~g~s~~Ti~~~l~~l   76 (324)
T 1xo0_A            3 EVRKNLMDMFRDRQAFSEHTWKMLLSVCRSWAAWCKLNNRK------WFPAEPEDVRDYLLYLQARGLAVKTIQQHLGQL   76 (324)
T ss_dssp             HHHHHHHHHHHTGGGSCHHHHHHHHHHHHHHHHHHHHHTCC------CSSCCHHHHHHHHHHHHHTTCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCC------CCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHH
T ss_conf             99999999999864859999999999999999999973989------567999999999999987799989999999998


Q ss_pred             HHHHHHHHHHCCCCCCCCCCCCCCC--------CCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCC
Q ss_conf             2222333210123222222222222--------22121111111015678776531013567757753201222100112
Q gi|254780882|r   96 KSFLKYLKKRKITTESNILNMRNLK--------KSNSLPRALNEKQALTLVDNVLLHTSHETKWIDARNSAILYLLYGCG  167 (328)
Q Consensus        96 r~f~~~~~~~~~i~~np~~~i~~~k--------~~~~~p~~lt~~e~~~ll~~~~~~~~~~~~~~~~Rd~~i~~ll~~TG  167 (328)
                      ++|++|+...+.+..+|......+.        .....+.+++.++...+....    .......+.|+.+++.+++.+|
T Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~r~~~~~~~~~~~~  152 (324)
T 1xo0_A           77 NMLHRRSGLPRPSDSNAVSLVMRRIRKENVDAGERAKQALAFERTDFDQVRSLM----ENSDRCQDIRNLAFLGIAYNTL  152 (324)
T ss_dssp             HHHHHHHTSCCGGGSHHHHHHHHHHHHHHHHTTCCCCCCCCCCHHHHHHHHHHH----SSCCCHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH----HCCCCHHHHHHHHHHHHHHHCC
T ss_conf             877899874264446336553010000145533233357768899999999866----4534077899999999876555


Q ss_pred             CCCCCCCCCCCCCCCCCCCCEEE----CCC---CCCCCCCCCCCCCHHHHHHHHHHHCCCCCC-------CCCCCCCCCC
Q ss_conf             33222221122222332322033----237---853100011221002343221110012344-------6655432111
Q gi|254780882|r  168 LRISEALSLTPQNIMDDQSTLRI----QGK---GDKIRIVPLLPSVRKAILEYYDLCPFDLNL-------NIQLPLFRGI  233 (328)
Q Consensus       168 lR~~El~~L~~~did~~~~~i~v----~gK---g~K~R~Vpi~~~~~~~l~~yl~~~~~~~~~-------~~~~~lF~~~  233 (328)
                      +|.+|++.+.+.|+++......+    .+|   +++.|.||+++.+.+++..|..........       ...+.+|.+.
T Consensus       153 ~r~~e~~~~~~~d~~~~~~~~~~~~~~~~k~~~~~~~r~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (324)
T 1xo0_A          153 LKIAEIARIRVKDISRTDGGRMLIHIGRTKTLVSTAGVEKALSLGVTKLVERWISVSGVADDPNNYLFCRVRKNGVAAPS  232 (324)
T ss_dssp             CCHHHHHHCBGGGEEEEETTEEEEEECCCCSSSSCSCEEEEECHHHHHHHHHHHHHHCGGGSTTSBSSCEECTTSCEECC
T ss_pred             CHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCC
T ss_conf             72898864112100015676300012344333236630220047799999999986022345432001014667665664


Q ss_pred             CCCCCCCCCHHHHHHHH---HHH----CCC-CCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHCHHH
Q ss_conf             12211100012356789---997----686-9998805417999999998489988999983788878979999619899
Q gi|254780882|r  234 RGKPLNPGVFQRYIRQL---RRY----LGL-PLSTTAHTLRHSFATHLLSNGGDLRSIQSILGHFRLSTTQIYTNVNSKN  305 (328)
Q Consensus       234 ~g~~ls~~~i~~~~~~~---~~~----~gi-~~~~spH~lRHtfAt~ll~~G~~~~~v~~~lGH~s~~tT~~Y~h~~~~~  305 (328)
                      .+.+++...+...+...   .+.    +|+ +.+++||+|||||||.|+++|+|+..||++|||+|++||++|+|..+++
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~H~lRHt~at~l~~~G~~~~~v~~~lGH~s~~tt~~Y~~~~~~~  312 (324)
T 1xo0_A          233 ATSQLSTRALEGIFEATHRLIYGAKDDSGQRYLAWSGHSARVGAARDMARAGVSIPEIMQAGGWTNVNIVMNYIRNLDSE  312 (324)
T ss_dssp             SSCCCCHHHHHHHHHHHHHHHHCSCCCSCCSCSSCCTTHHHHHHHHHHHHTTCCHHHHHHHHTCSSSSSHHHHSTTSGGG
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHCCCHHH
T ss_conf             45666640255677888899999988617888877886319999999998789999999882899889999983564688


Q ss_pred             HHHHHHHHHHH
Q ss_conf             99999999998
Q gi|254780882|r  306 GGDWMMEIYDQ  316 (328)
Q Consensus       306 ~~~~l~~~~~~  316 (328)
                      . .++.++.++
T Consensus       313 ~-~~~~~~~~~  322 (324)
T 1xo0_A          313 T-GAMVRLLED  322 (324)
T ss_dssp             C-CHHHHHHTC
T ss_pred             H-HHHHHHHHC
T ss_conf             9-999998755