HHsearch results for GI: 254780882 and protein with PDBid: 1xo0_A
>1xo0_A Recombinase CRE; CRE recombinase, holliday junction, recombination,complex (recombinase/DNA), hydrolase, ligase/DNA complex; 2.00A {Enterobacteria phage P1} SCOP: a.60.9.1 d.163.1.1 PDB: 3crx_A* 1kbu_A 1ma7_A 1q3u_A* 1q3v_A* 3mgv_A* 1ouq_A* 1nzb_A* 2crx_A* 1xns_A 5crx_A* 1f44_A* 2hof_A 2hoi_A 4crx_A* 1drg_A 3c29_A* 3c28_A 1crx_A* 1pvr_A ...
Probab=100.00 E-value=5.3e-41 Score=274.07 Aligned_cols=290 Identities=11% Similarity=0.098 Sum_probs=212.3
Q ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999862548899999999999999999851214788789689899999999999986121013321123444
Q gi|254780882|r 16 KERQNWLQNLEIERGLSKLTLQSYECDTRQFLIFLAFYTEEKITIQTIRQLSYTEIRAFISKRRTQKIGDRSLKRSLSGI 95 (328)
Q Consensus 16 ~~~e~~L~~l~~~r~~s~~T~~~Y~~~l~~f~~~~~~~~~~~~~~~~~~~i~~~~i~~~l~~l~~~~~s~~T~~~~ls~l 95 (328)
+..+.++++++..+++|++|+++|...++.|..||...... +.++++.+|.+|+.++..+|++++|+++++++|
T Consensus 3 ~~~~~~~~~~~~~~~~s~~T~~~y~~~~~~f~~f~~~~~~~------~~~it~~~v~~y~~~l~~~g~s~~Ti~~~l~~l 76 (324)
T 1xo0_A 3 EVRKNLMDMFRDRQAFSEHTWKMLLSVCRSWAAWCKLNNRK------WFPAEPEDVRDYLLYLQARGLAVKTIQQHLGQL 76 (324)
T ss_dssp HHHHHHHHHHHTGGGSCHHHHHHHHHHHHHHHHHHHHHTCC------CSSCCHHHHHHHHHHHHHTTCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCC------CCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHH
T ss_conf 99999999999864859999999999999999999973989------567999999999999987799989999999998
Q ss_pred HHHHHHHHHHCCCCCCCCCCCCCCC--------CCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCC
Q ss_conf 2222333210123222222222222--------22121111111015678776531013567757753201222100112
Q gi|254780882|r 96 KSFLKYLKKRKITTESNILNMRNLK--------KSNSLPRALNEKQALTLVDNVLLHTSHETKWIDARNSAILYLLYGCG 167 (328)
Q Consensus 96 r~f~~~~~~~~~i~~np~~~i~~~k--------~~~~~p~~lt~~e~~~ll~~~~~~~~~~~~~~~~Rd~~i~~ll~~TG 167 (328)
++|++|+...+.+..+|......+. .....+.+++.++...+.... .......+.|+.+++.+++.+|
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~r~~~~~~~~~~~~ 152 (324)
T 1xo0_A 77 NMLHRRSGLPRPSDSNAVSLVMRRIRKENVDAGERAKQALAFERTDFDQVRSLM----ENSDRCQDIRNLAFLGIAYNTL 152 (324)
T ss_dssp HHHHHHHTSCCGGGSHHHHHHHHHHHHHHHHTTCCCCCCCCCCHHHHHHHHHHH----SSCCCHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH----HCCCCHHHHHHHHHHHHHHHCC
T ss_conf 877899874264446336553010000145533233357768899999999866----4534077899999999876555
Q ss_pred CCCCCCCCCCCCCCCCCCCCEEE----CCC---CCCCCCCCCCCCCHHHHHHHHHHHCCCCCC-------CCCCCCCCCC
Q ss_conf 33222221122222332322033----237---853100011221002343221110012344-------6655432111
Q gi|254780882|r 168 LRISEALSLTPQNIMDDQSTLRI----QGK---GDKIRIVPLLPSVRKAILEYYDLCPFDLNL-------NIQLPLFRGI 233 (328)
Q Consensus 168 lR~~El~~L~~~did~~~~~i~v----~gK---g~K~R~Vpi~~~~~~~l~~yl~~~~~~~~~-------~~~~~lF~~~ 233 (328)
+|.+|++.+.+.|+++......+ .+| +++.|.||+++.+.+++..|.......... ...+.+|.+.
T Consensus 153 ~r~~e~~~~~~~d~~~~~~~~~~~~~~~~k~~~~~~~r~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (324)
T 1xo0_A 153 LKIAEIARIRVKDISRTDGGRMLIHIGRTKTLVSTAGVEKALSLGVTKLVERWISVSGVADDPNNYLFCRVRKNGVAAPS 232 (324)
T ss_dssp CCHHHHHHCBGGGEEEEETTEEEEEECCCCSSSSCSCEEEEECHHHHHHHHHHHHHHCGGGSTTSBSSCEECTTSCEECC
T ss_pred CHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCC
T ss_conf 72898864112100015676300012344333236630220047799999999986022345432001014667665664
Q ss_pred CCCCCCCCCHHHHHHHH---HHH----CCC-CCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHCHHH
Q ss_conf 12211100012356789---997----686-9998805417999999998489988999983788878979999619899
Q gi|254780882|r 234 RGKPLNPGVFQRYIRQL---RRY----LGL-PLSTTAHTLRHSFATHLLSNGGDLRSIQSILGHFRLSTTQIYTNVNSKN 305 (328)
Q Consensus 234 ~g~~ls~~~i~~~~~~~---~~~----~gi-~~~~spH~lRHtfAt~ll~~G~~~~~v~~~lGH~s~~tT~~Y~h~~~~~ 305 (328)
.+.+++...+...+... .+. +|+ +.+++||+|||||||.|+++|+|+..||++|||+|++||++|+|..+++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~H~lRHt~at~l~~~G~~~~~v~~~lGH~s~~tt~~Y~~~~~~~ 312 (324)
T 1xo0_A 233 ATSQLSTRALEGIFEATHRLIYGAKDDSGQRYLAWSGHSARVGAARDMARAGVSIPEIMQAGGWTNVNIVMNYIRNLDSE 312 (324)
T ss_dssp SSCCCCHHHHHHHHHHHHHHHHCSCCCSCCSCSSCCTTHHHHHHHHHHHHTTCCHHHHHHHHTCSSSSSHHHHSTTSGGG
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHCCCHHH
T ss_conf 45666640255677888899999988617888877886319999999998789999999882899889999983564688
Q ss_pred HHHHHHHHHHH
Q ss_conf 99999999998
Q gi|254780882|r 306 GGDWMMEIYDQ 316 (328)
Q Consensus 306 ~~~~l~~~~~~ 316 (328)
. .++.++.++
T Consensus 313 ~-~~~~~~~~~ 322 (324)
T 1xo0_A 313 T-GAMVRLLED 322 (324)
T ss_dssp C-CHHHHHHTC
T ss_pred H-HHHHHHHHC
T ss_conf 9-999998755