HHsearch results for GI: 254780882 and protein with PDBid: 2kj5_A
>2kj5_A Phage integrase; GFT NMR, PSI-2, NESG, structural genomics, protein structure initiative; NMR {Nitrosospira multiformis atcc 25196}
Probab=98.64 E-value=5e-08 Score=68.11 Aligned_cols=107 Identities=9% Similarity=0.087 Sum_probs=78.7
Q ss_pred HHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 43149899999999999999862548899999999999999999851214788789689899999999999986121013
Q gi|254780882|r 7 PEIVSFELLKERQNWLQNLEIERGLSKLTLQSYECDTRQFLIFLAFYTEEKITIQTIRQLSYTEIRAFISKRRTQKIGDR 86 (328)
Q Consensus 7 ~~~~~~~l~~~~e~~L~~l~~~r~~s~~T~~~Y~~~l~~f~~~~~~~~~~~~~~~~~~~i~~~~i~~~l~~l~~~~~s~~ 86 (328)
.+....++.++++.|++.... + ...|...|++.+.. +..+.++..++.+|+..++..|++.+... .++.
T Consensus 2 aek~~~T~~~l~~~w~e~~~~--~-~~~~~~~~~~~~~~-------~i~p~~G~~~i~~It~~~i~~~~~~i~~~-~~~~ 70 (116)
T 2kj5_A 2 AEKNAYTVAQLADEYFERMIA--G-RWKHPNIVRSRIEK-------DIKPAIGSLKVEDVKPRHIDDVLKAVMKR-GAPS 70 (116)
T ss_dssp CSSSCCBHHHHHHHHHHHHTT--T-SCSCHHHHHHHHHH-------TTSCSGGGSBSSSCCHHHHHHHHHHHHHH-TCHH
T ss_pred CCCCCCHHHHHHHHHHHHHHH--C-CCCHHHHHHHHHHH-------HHHHHHCCCCHHHCCHHHHHHHHHHHHHH-CCCH
T ss_conf 765543399999999998604--7-88819999999997-------84898787808870899999999999983-6657
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
Q ss_conf 32112344422223332101232222222222222212
Q gi|254780882|r 87 SLKRSLSGIKSFLKYLKKRKITTESNILNMRNLKKSNS 124 (328)
Q Consensus 87 T~~~~ls~lr~f~~~~~~~~~i~~np~~~i~~~k~~~~ 124 (328)
|+++.++.|+++|+||++.++++.||+.+|+.++...+
T Consensus 71 ta~~~~~~l~~i~~~A~~~~~i~~NP~~~i~~~~~g~k 108 (116)
T 2kj5_A 71 IANDTLRWLKRMFNYAIKRHIIEYNPAAAFDPGDAGGK 108 (116)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSCSSCGGGGSCCCCCCCC
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
T ss_conf 79999999999999999877956697244972458963