HHsearch results for GI: 254780882 and protein with PDBid: 2kj8_A

>2kj8_A Putative prophage CPS-53 integrase; INTS, INTC, YFDB, DNA integration, DNA recombination, structural genomics, protein structure initiative; NMR {Escherichia coli k-12}
Probab=98.61  E-value=4.4e-08  Score=68.41  Aligned_cols=95  Identities=6%  Similarity=0.000  Sum_probs=76.3

Q ss_pred             HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             99999999999999862548899999999999999999851214788789689899999999999986121013321123
Q gi|254780882|r   13 ELLKERQNWLQNLEIERGLSKLTLQSYECDTRQFLIFLAFYTEEKITIQTIRQLSYTEIRAFISKRRTQKIGDRSLKRSL   92 (328)
Q Consensus        13 ~l~~~~e~~L~~l~~~r~~s~~T~~~Y~~~l~~f~~~~~~~~~~~~~~~~~~~i~~~~i~~~l~~l~~~~~s~~T~~~~l   92 (328)
                      ++.+.+++|++..+  ..++++|...|...++..   +.    +.+|..++.+|+..+|..++..+..+| ++.|+++.+
T Consensus         6 TF~~~a~eWle~~k--~~~~~~t~~~~~~~l~~~---i~----P~lG~~~i~~It~~~i~~~l~~i~~~g-~~~ta~r~~   75 (118)
T 2kj8_A            6 SFSAIYKEWYEHKK--QVWSVGYATELAKMFDDD---IL----PIIGGLEIQDIEPMQLLEVIRRFEDRG-AMERANKAR   75 (118)
T ss_dssp             BHHHHHHHHHHHHT--TTSCHHHHHHHHHHHHHH---HH----HHHTTSBTTSCCHHHHHHHHHHHHTTT-CHHHHHHHH
T ss_pred             HHHHHHHHHHHHHC--CCCCHHHHHHHHHHHHHH---HH----HHHCCCCHHHHCHHHHHHHHHHHHHCC-CHHHHHHHH
T ss_conf             79999999999852--438887999999999988---78----884898299937999999999999959-979999999


Q ss_pred             HHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf             4442222333210123222222222
Q gi|254780882|r   93 SGIKSFLKYLKKRKITTESNILNMR  117 (328)
Q Consensus        93 s~lr~f~~~~~~~~~i~~np~~~i~  117 (328)
                      +.++++|+||+..|+++.||+.+++
T Consensus        76 ~~l~~if~~Av~~~~i~~NP~~~i~  100 (118)
T 2kj8_A           76 RRCGEVFRYAIVTGRAKYNPAPDLA  100 (118)
T ss_dssp             HHHHHHHHHHHHTTSCSCCSHHHHH
T ss_pred             HHHHHHHHHHHHCCCCCCCCHHHHH
T ss_conf             9999999999985880238278898