Probab=99.96 E-value=1.2e-30 Score=207.85 Aligned_cols=164 Identities=24% Similarity=0.291 Sum_probs=123.8
Q ss_pred CCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCC
Q ss_conf 11111101567877653101356775775320122210011233222221122222332322033237853100011221
Q gi|254780882|r 126 PRALNEKQALTLVDNVLLHTSHETKWIDARNSAILYLLYGCGLRISEALSLTPQNIMDDQSTLRIQGKGDKIRIVPLLPS 205 (328)
Q Consensus 126 p~~lt~~e~~~ll~~~~~~~~~~~~~~~~Rd~~i~~ll~~TGlR~~El~~L~~~did~~~~~i~v~gKg~K~R~Vpi~~~ 205 (328)
..+||.+|+.++++++.....+ ..++++.+++.||||+||+++|+|+||+++.. ..+.+|++++|.|||++.
T Consensus 4 ~~~Lt~eEi~~l~~~~~~~~~~-------~~~~~i~l~~~tG~R~~E~~~L~~~dI~~~~~-~~~~~K~~~~r~ipl~~~ 75 (170)
T d1aiha_ 4 LAFLYERDIYRLLAECDNSRNP-------DLGLIVRICLATGARWSEAETLTQSQVMPYKI-TFTNTKSKKNRTVPISDE 75 (170)
T ss_dssp CCCCCHHHHHHHHHHHTTSSST-------THHHHHHHHHHHCCCHHHHHTCBTTTEETTEE-EEESSSSSCEEEEECCHH
T ss_pred CCCCCHHHHHHHHHHHHHCCCH-------HHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCE-EECCCCCCCHHHHHHHHH
T ss_conf 6689999999999986365896-------69999999999777611244433102442110-211444430057766999
Q ss_pred CHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHH
Q ss_conf 00234322111001234466554321111221110001235678999768699988054179999999984899889999
Q gi|254780882|r 206 VRKAILEYYDLCPFDLNLNIQLPLFRGIRGKPLNPGVFQRYIRQLRRYLGLPLSTTAHTLRHSFATHLLSNGGDLRSIQS 285 (328)
Q Consensus 206 ~~~~l~~yl~~~~~~~~~~~~~~lF~~~~g~~ls~~~i~~~~~~~~~~~gi~~~~spH~lRHtfAt~ll~~G~~~~~v~~ 285 (328)
+.+.|..+ .+++|... .............+++++++||+|||||||.|+++|+|+.+|++
T Consensus 76 ~~~~l~~~------------~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~H~lRht~at~l~~~g~~~~~i~~ 135 (170)
T d1aiha_ 76 LFDMLPKK------------RGRLFNDA--------YESFENAVLRAEIELPKGQLTHVLRHTFASHFMMNGGNILVLKE 135 (170)
T ss_dssp HHHHSCCC------------SSBSSCCC--------HHHHHHHHHHTTCCCCTTCTTTHHHHHHHHHHHHTTCCHHHHHH
T ss_pred HHHHHHHH------------HCCCCCCC--------HHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHCCCCCHHHHHH
T ss_conf 99998751------------00110111--------12443345666502577610111046551455216989999999
Q ss_pred HHCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHCCCHH
Q ss_conf 8378887897999961989999999999998173000
Q gi|254780882|r 286 ILGHFRLSTTQIYTNVNSKNGGDWMMEIYDQTHPSIT 322 (328)
Q Consensus 286 ~lGH~s~~tT~~Y~h~~~~~~~~~l~~~~~~~~~~~~ 322 (328)
+|||+|++||++|+|+++++. ++++ +.||+..
T Consensus 136 ~lGH~~~~~t~~Y~~~~~~~~----~~a~-~~~p~~~ 167 (170)
T d1aiha_ 136 ILGHSTIEMTMRYAHFAPSHL----ESAV-KFNPLSN 167 (170)
T ss_dssp HHTCSSHHHHGGGGGGSCCCT----THHH-HHSTTTS
T ss_pred HHCCCCHHHHHHHHCCCHHHH----HHHH-HHCCCCC
T ss_conf 808999899998876799999----9999-8685768
class: Alpha and beta proteins (a+b)
fold: DNA breaking-rejoining enzymes
superfamily: DNA breaking-rejoining enzymes
family: Lambda integrase-like, catalytic core
domain: Integrase
species: Bacteriophage HP1 [TaxId: 10690]