RPSBLAST alignment for GI: 254780882 and conserved domain: cd01189
>gnl|CDD|29510 cd01189, INT_phiLC3_C, phiLC3 phage and phage-related integrases, site-specific recombinases, DNA breaking-rejoining enzymes, C-terminal catalytic domain. This CD includes various bacterial (mainly gram positive) and phage integrases, including those similar to Lactococcus phage phiLC3, TPW22, Tuc2009, BK5-T, A2, bIL285, bIL286, bIL311, ul36 and phi g1e; Staphylococcus aureus phage phi13 and phi42; Oenococcus oeni phage fOg44; Streptococcus thermophilus phage O1205 and Sfi21; and Streptococcus pyogenes phage T12 and T270.. Length = 191
Score = 72.2 bits (177), Expect = 2e-13
Identities = 49/195 (25%), Positives = 84/195 (43%), Gaps = 27/195 (13%)
Query: 129 LNEKQALTLVDNVLLHTSHETKWIDARNSAILYLLYGCGLRISEALSLTPQNIMDDQSTL 188
L +++ L++ + H + +K + + LL GLRI EAL+LT +I + +T+
Sbjct: 3 LTKEELKKLLEYLKKHENSFSKLL-------ILLLAYTGLRIGEALALTWSDIDFENNTI 55
Query: 189 RIQ-------GKGDK--------IRIVPLLPSVRKAILEYYDLCPFDLNLNI---QLPLF 230
I G IR +PL + EY L I +F
Sbjct: 56 TINKTWDYKTGGYIFKPPKTKSSIRTIPLDKKTIAILKEYKKEQKKYLLGEINNDDELVF 115
Query: 231 RGIRGKPLNPGVFQRYIRQLRRYLGLPLSTTAHTLRHSFATHLLSNGGDLRSIQSILGHF 290
GK P + ++++ + G+P T H LRH+ A+ LL G ++ + LGH
Sbjct: 116 TNKGGKISTPSTINKRLKRICKKAGIP-KITFHGLRHTHASLLLEAGVSIKYVSERLGHA 174
Query: 291 RLSTT-QIYTNVNSK 304
+STT Y+++ +
Sbjct: 175 DISTTLDTYSHLLPE 189