RPSBLAST alignment for GI: 254780882 and conserved domain: cd01197
>gnl|CDD|29518 cd01197, INT_FimBE_C, FimB and FimE and related proteins, DNA breaking-rejoining enzymes, integrase/recombinases, catalytic domain. This CD includes those proteins similar to E.coli FimE and FimB regulatory proteins and Proteus mirabilis MrpI.. Length = 180
Score = 61.9 bits (150), Expect = 2e-10
Identities = 47/156 (30%), Positives = 71/156 (45%), Gaps = 10/156 (6%)
Query: 154 ARNSAILYLLYGCGLRISEALSLTPQNIMDDQSTLRIQG-KGDKIRIVPLLPSVRKAILE 212
AR+ ++ L++ GLR+SEA L +I + + I+ KG PL +A+
Sbjct: 24 ARDYCLMLLMFRHGLRVSEACGLKLSDIDLESRQIYIRRLKGGFSTTHPLRDDELEALKN 83
Query: 213 YYDLCPFDLNLNIQLP----LFRGIRGKPLNPGVFQRYIRQLRRYLGLPLSTTAHTLRHS 268
+ ++ LP +F RG PL+ + IR+L GL + H LRH+
Sbjct: 84 W-----LEIRAWKGLPDSDWIFLSRRGGPLSRQQVYKLIRRLGAQAGLSIKVHPHMLRHA 138
Query: 269 FATHLLSNGGDLRSIQSILGHFRLSTTQIYTNVNSK 304
L + G D R IQ LGH + T IYT N+
Sbjct: 139 CGYALANQGADTRLIQDYLGHRNIRHTVIYTASNAA 174