RPSBLAST alignment for GI: 254780882 and conserved domain: COG0582
>gnl|CDD|30927 COG0582, XerC, Integrase [DNA replication, recombination, and repair]. Length = 309
Score = 46.5 bits (107), Expect = 1e-05
Identities = 61/273 (22%), Positives = 107/273 (39%), Gaps = 19/273 (6%)
Query: 48 IFLAFYTEEKITIQTIRQLSYTEIRAFISKRRTQKIGDRSLKRSLSGIKSFLKYLKKRKI 107
I L + + T+R L E + + L+ ++ F YL
Sbjct: 48 ILLEALGDLPLAEITVRDLLRAEAELRGKLETALRESTLTRVFRLAALRGFFAYLDNPGA 107
Query: 108 TTESNILNMRNLKKSNSLPRALNEKQALTLVDNVLLHTSHETKWIDARNSAILYLLYGCG 167
++ K+ LP+AL ++ L++ + + + L+ G
Sbjct: 108 PLKAL---REKPKRRKKLPKALTAEEVEALLEALDRYRDALR---------LALLILLTG 155
Query: 168 LRISEALSLTPQNIMDDQSTLRIQGKGDKI---RIVPLLPSVRKAILEYYDLCPFDLNLN 224
LR+SE L L +I + T+ I+G K R VPL +A+ +Y + L
Sbjct: 156 LRVSELLGLRWSDIDLENGTIWIRGTKTKGRKERRVPLSEQALEALKKYLLIRRPREYLF 215
Query: 225 IQLPLFRGIRGKPLNPGVFQRYIRQLRRYLGLPLSTTAHTLRHSFATHLLSNGGDLRSIQ 284
+ L + L R + + G+ T H LRH+FAT LL GGD R IQ
Sbjct: 216 LSLR-GPRLSRSALTINRLLRARAKAAKEAGIR-KITPHGLRHTFATLLL-AGGDERVIQ 272
Query: 285 SILGH-FRLSTTQIYTNVNSKNGGDWMMEIYDQ 316
+LGH +T +Y + + + + +++ +
Sbjct: 273 KLLGHASLNTTQTVYYHASDERLKEAALKLLEL 305