RPSBLAST alignment of GI: 254780882 and protein with PDBid: 1a0p

>1a0p_A Site-specific recombinase XERD; DNA binding, DNA recombination; 2.50A {Escherichia coli} SCOP: a.60.9.1 d.163.1.1 Length = 290
 Score =  123 bits (307), Expect = 8e-29
 Identities = 85/302 (28%), Positives = 147/302 (48%), Gaps = 17/302 (5%)

Query: 15  LKERQNWLQNLEIERGLSKLTLQSYECDTRQFLIFLAFYTEEKITIQTIRQLSYTEIRAF 74
           L   + +L  L +E+ L++ TL +Y  D    + +L       +T+ T       +++A 
Sbjct: 3   LARIEQFLDALWLEKNLAENTLNAYRRDLSMMVEWLH---HRGLTLATA---QSDDLQAL 56

Query: 75  ISKRRTQKIGDRSLKRSLSGIKSFLKYLKKRKITTESNILNMRNLKKSNSLPRALNEKQA 134
           +++R        S  R LS ++   +YL + K   +    ++ + K    LP+ L+E Q 
Sbjct: 57  LAERLEGGYKATSSARLLSAVRRLFQYLYREKFREDDPSAHLASPKLPQRLPKDLSEAQ- 115

Query: 135 LTLVDNVLLHTSHETKWIDARNSAILYLLYGCGLRISEALSLTPQNIMDDQSTLRIQGKG 194
                  LL      + ++ R+ A+L +LY  GLR+SE + LT  +I   Q  +R+ GKG
Sbjct: 116 ----VERLLQAPLIDQPLELRDKAMLEVLYATGLRVSELVGLTMSDISLRQGVVRVIGKG 171

Query: 195 DKIRIVPLLPSVRKAILEYYDLCPFDLNLNIQLPLFRGI-RGKPLNPGVFQRYIRQLRRY 253
           +K R+VPL       +  Y +     L   + + +     R + +    F   I+     
Sbjct: 172 NKERLVPLGEEAVYWLETYLEHGRPWLLNGVSIDVLFPSQRAQQMTRQTFWHRIKHYAVL 231

Query: 254 LGLPLST-TAHTLRHSFATHLLSNGGDLRSIQSILGHFRLSTTQIYTNVNSKNGGDWMME 312
            G+     + H LRH+FATHLL++G DLR +Q +LGH  LSTTQIYT+V ++     + +
Sbjct: 232 AGIDSEKLSPHVLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVATER----LRQ 287

Query: 313 IY 314
           ++
Sbjct: 288 LH 289