RPSBLAST alignment of GI: 254780882 and protein with PDBid: 1ae9

>1ae9_A Lambda integrase; DNA recombination, site-specific recombination; 1.90A {Bacteriophage lambda} SCOP: d.163.1.1 Length = 179

 Score = 61.0 bits (146), Expect = 3e-10
 Identities = 26/177 (14%), Positives = 53/177 (29%), Gaps = 9/177 (5%)

Query: 132 KQALTL--VDNVLLHTSHETKWIDARNSAILYLLYGCGLRISEALSLTPQNIMDDQSTLR 189
           +  LT      +         W+       + L    G R+ +   +   +I+D    + 
Sbjct: 1   RSRLTADEYLKIYQAAESSPCWL----RLAMELAVVTGQRVGDLCEMKWSDIVDGYLYVE 56

Query: 190 IQGKGDKIRIVPLLPSVRKAILEYYDLCPFDLNLNIQLPLFRGIRGKPLNPGVFQRYIRQ 249
               G K   +P    +    +   +       +     +    R +PL+ G   RY  +
Sbjct: 57  QSKTGVK-IAIPTALHIDALGISMKETLDKCKEILGGETIIASTRREPLSSGTVSRYFMR 115

Query: 250 LRRYLGL--PLSTTAHTLRHSFATHLLSNGGDLRSIQSILGHFRLSTTQIYTNVNSK 304
            R+  GL             S +  L       +  Q +LGH   +    + +   +
Sbjct: 116 ARKASGLSFEGDPPTFHELRSLSARLYEKQISDKFAQHLLGHKSDTMASQFRDDRGR 172