RPSBLAST alignment of GI: 254780882 and protein with PDBid: 1z1b

>1z1b_A Integrase; protein-DNA complex, DNA binding protein/DNA complex; HET: PTR; 3.80A {Enterobacteria phage lambda} SCOP: d.10.1.4 d.163.1.1 PDB: 1z1g_A 1kjk_A 2wcc_3* Length = 356

 Score = 82.6 bits (202), Expect = 1e-16
 Identities = 46/289 (15%), Positives = 85/289 (29%), Gaps = 24/289 (8%)

Query: 19  QNWLQNLEIERGLSKLTLQSYECDTRQFLIFLAFYTEEKITIQTIRQLSYTEIRAFISKR 78
             + + L   RG+ + TL +Y    +     L     E IT + I           +   
Sbjct: 81  DRYEKILA-SRGIKQKTLINYMSKIKAIRRGLPDAPLEDITTKEIAA---------MLNG 130

Query: 79  RTQKIGDRSLKRSLSGIKSFLKYLKKRKITTESNILNMRNLKKSNSLPRALNEKQALTLV 138
              +    S K   S +    +        T +++   R  K      R           
Sbjct: 131 YIDEGKAASAKLIRSTLSDAFREAIAEGHITTNHVAATRAAKSKVRRSRL---------T 181

Query: 139 DNVLLHTSHETKWIDARNSAILYLLYGCGLRISEALSLTPQNIMDDQSTLRIQGKGDKIR 198
            +  L      +         + L    G R+ +   +   +I+D    +     G K  
Sbjct: 182 ADEYLKIYQAAESSPCWLRLAMELAVVTGQRVGDLCEMKWSDIVDGYLYVEQSKTGVK-I 240

Query: 199 IVPLLPSVRKAILEYYDLCPFDLNLNIQLPLFRGIRGKPLNPGVFQRYIRQLRRYLGLPL 258
            +P    +    +   +       +     +    R +PL+ G   RY  + R+  GL  
Sbjct: 241 AIPTALHIDALGISMKETLDKCKEILGGETIIASTRREPLSSGTVSRYFMRARKASGLSF 300

Query: 259 ST---TAHTLRHSFATHLLSNGGDLRSIQSILGHFRLSTTQIYTNVNSK 304
                T H LR   +  L       +  Q +LGH   +    Y +   +
Sbjct: 301 EGDPPTFHELRS-LSARLYEKQISDKFAQHLLGHKSDTMASQYRDDRGR 348