RPSBLAST alignment of GI: 254780882 and SCOP domain: d1a0pa1

Alignment

>d1a0pa1 a.60.9.1 (A:3-100) Recombinase XerD {Escherichia coli [TaxId: 562]} Length = 98

 Score = 54.0 bits (129), Expect = 2e-08
 Identities = 20/97 (20%), Positives = 41/97 (42%), Gaps = 6/97 (6%)

Query: 15  LKERQNWLQNLEIERGLSKLTLQSYECDTRQFLIFLAFYTEEKITIQTIRQLSYTEIRAF 74
           L   + +L  L +E+ L++ TL +Y  D    + +L           T+      +++A 
Sbjct: 3   LARIEQFLDALWLEKNLAENTLNAYRRDLSMMVEWLHHR------GLTLATAQSDDLQAL 56

Query: 75  ISKRRTQKIGDRSLKRSLSGIKSFLKYLKKRKITTES 111
           +++R        S  R LS ++   +YL + K   + 
Sbjct: 57  LAERLEGGYKATSSARLLSAVRRLFQYLYREKFREDD 93

SCOP domain information

class: All alpha proteins
fold: SAM domain-like
superfamily: lambda integrase-like, N-terminal domain
family: lambda integrase-like, N-terminal domain
domain: Recombinase XerD
species: Escherichia coli [TaxId: 562]