HHsearch alignment for GI: 254780885 and conserved domain: TIGR03030
>TIGR03030 CelA cellulose synthase catalytic subunit (UDP-forming). Cellulose synthase catalyzes the beta-1,4 polymerization of glucose residues in the formation of cellulose. In bacteria, the substrate is UDP-glucose. The synthase consists of two subunits (or domains in the frequent cases where it is encoded as a single polypeptide), the catalytic domain modelled here and the regulatory domain (pfam03170). The regulatory domain binds the allosteric activator cyclic di-GMP. The protein is membrane-associated and probably assembles into multimers such that the individual cellulose strands can self-assemble into multi-strand fibrils.
Probab=97.42 E-value=0.0061 Score=38.32 Aligned_cols=79 Identities=20% Similarity=0.123 Sum_probs=57.0
Q ss_pred CCHHCCCCCCCCCCCCCEEEEEECCCCEEEEEEEEEECCCEEEECC------CCCCCCCEEEE----CC----EEEEEEE
Q ss_conf 5021025674777765136899579988989999874242045515------77899855897----34----6699999
Q gi|254780885|r 114 LQDCRAYGRKITRDREVDAQLVLNDNTKHSCKVIDISESGVSVSVD------LQIEMFSKVLF----ND----ILGRVVR 179 (207)
Q Consensus 114 l~e~R~h~R~vPr~~~~~~~l~l~DG~~~~criiDiS~SGAAi~~~------~rp~iGs~V~v----G~----~~grVVR 179 (207)
T Consensus 566 ~~q~R~~~R~~~~~~---~~l~~~~g~~~~~~t~D~S~gG~~i~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~v~~ 642 (713)
T TIGR03030 566 RRQRRSSPRIPCKIP---AEVQRDGGRWVEATVEDASVGGLGIKINAQGAPGPQLGAGVLVQIRPKRNGLPALKPARVRG 642 (713)
T ss_pred CCCCCCCCCEEECCE---EEEEECCCCEEEEEEEECCCCCEEEEECCCCCCCCCCCCCCEEEEEECCCCEEEEEEEEEEE
T ss_conf 554465661561324---99997899789999988167861798457767665678883399996579816787799995
Q ss_pred EECCEEEEEECCCCCC
Q ss_conf 9389089997167784
Q gi|254780885|r 180 IFPGGIAIEFSSVQES 195 (207)
Q Consensus 180 h~~~GfaVeF~~~q~~ 195 (207)
T Consensus 643 ~~~~~~~l~f~~~~~~ 658 (713)
T TIGR03030 643 AGGVMIGLEFSPLNVQ 658 (713)
T ss_pred CCCCEEEEEEECCCHH
T ss_conf 5897799998159989