HHsearch alignment for GI: 254780885 and conserved domain: pfam07238
>pfam07238 PilZ PilZ domain. This domain is found in a wide variety of bacterial signalling proteins.
Probab=98.27 E-value=5.6e-06 Score=56.90 Aligned_cols=86 Identities=24% Similarity=0.287 Sum_probs=65.8
Q ss_pred HHCCCCCCCCCCCCCEEEEEECCCCEEEEEEEEEECCCEEEECCCCCCCCCEEEE-------CC---EEEEEEEEECC--
Q ss_conf 2102567477776513689957998898999987424204551577899855897-------34---66999999389--
Q gi|254780885|r 116 DCRAYGRKITRDREVDAQLVLNDNTKHSCKVIDISESGVSVSVDLQIEMFSKVLF-------ND---ILGRVVRIFPG-- 183 (207)
Q Consensus 116 e~R~h~R~vPr~~~~~~~l~l~DG~~~~criiDiS~SGAAi~~~~rp~iGs~V~v-------G~---~~grVVRh~~~-- 183 (207)
T Consensus 1 ~rR~~~R~~~~~~~---~~~~~~~~~~~~~~~DiS~gG~~i~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~Vv~~~~~~~ 77 (102)
T pfam07238 1 QRRREPRVPVNLPV---TLLLGGGELYSGVIIDISLGGAALRLPEPLQLGDEVRLRLTLPDDGIKLLVPGRVVRIRPDGD 77 (102)
T ss_pred CCCCCCEECEEEEE---EEECCCCCEEEEEEHHHCCCCEEEECCCCCCCCCEEEEEEEECCCCEEEEEEEEEEEECCCCC
T ss_conf 96787450357889---999389989999964437884899708765579719999996999808982789999915898
Q ss_pred --EEEEEECCCCCCCHHHHHHHHHC
Q ss_conf --08999716778423677875303
Q gi|254780885|r 184 --GIAIEFSSVQESNIAFKSLINHC 206 (207)
Q Consensus 184 --GfaVeF~~~q~~~~~~~~~~~~~ 206 (207)
T Consensus 78 ~~~~G~~F~~~~--~~~~~~l~~~~ 100 (102)
T pfam07238 78 GYGVGVQFLELD--EESRRLLERLL 100 (102)
T ss_pred CEEEEEEEEECC--HHHHHHHHHHH
T ss_conf 289988995399--99999879862