Query gi|254780886|ref|YP_003065299.1| hypothetical protein CLIBASIA_03915 [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 41
No_of_seqs 1 out of 3
Neff 1.0
Searched_HMMs 13730
Date Wed Jun 1 10:21:41 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 254780886.hhm -d /home/congqian_1/database/scop/scop70_1_75.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1x5wa1 g.37.1.1 (A:8-35) Zinc 12.3 21 0.0015 16.4 -0.0 17 18-34 5-21 (28)
2 d1vloa1 b.44.2.1 (A:278-367) G 5.8 39 0.0028 15.2 -0.9 17 16-32 33-49 (90)
3 d1v0da_ d.4.1.7 (A:) Caspase-a 5.4 41 0.003 15.1 -1.0 10 24-33 174-183 (245)
4 d1u0la1 b.40.4.5 (A:3-68) Prob 3.7 1.5E+02 0.011 12.6 0.8 29 1-29 1-36 (66)
5 d1pj5a1 b.44.2.1 (A:743-830) N 3.3 84 0.0061 13.7 -0.8 17 16-32 30-46 (88)
6 d1wosa1 b.44.2.1 (A:279-361) G 3.2 82 0.006 13.7 -0.9 16 17-32 29-44 (83)
7 d1iaza_ b.97.1.1 (A:) Equinato 3.2 85 0.0062 13.7 -0.8 15 15-29 96-110 (175)
8 d1z0sa1 e.52.1.1 (A:1-249) Ino 3.0 2.1E+02 0.015 11.9 1.5 19 3-21 144-162 (249)
9 d1gwya_ b.97.1.1 (A:) Sticholy 2.8 1E+02 0.0076 13.3 -0.7 15 15-29 98-112 (175)
10 d1roca_ b.1.22.1 (A:) Anti-sil 2.8 1.1E+02 0.0081 13.2 -0.6 15 10-24 89-103 (155)
No 1
>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}
Probab=12.29 E-value=21 Score=16.38 Aligned_cols=17 Identities=47% Similarity=0.608 Sum_probs=12.9
Q ss_pred HHCCCCEEEHHHHEEEE
Q ss_conf 12031101277630110
Q gi|254780886|r 18 MSSCSYSWNLKHAIRKI 34 (41)
Q Consensus 18 msscsyswnlkhairki 34 (41)
-+.||||-.-|-|.|--
T Consensus 5 c~ecsyscsskaalrvh 21 (28)
T d1x5wa1 5 CSECSYSCSSKAALRIH 21 (28)
T ss_dssp CSSSSCEESSHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHH
T ss_conf 76564556868888776
No 2
>d1vloa1 b.44.2.1 (A:278-367) Glycine cleavage system T protein, GcvT {Escherichia coli [TaxId: 562]}
Probab=5.81 E-value=39 Score=15.20 Aligned_cols=17 Identities=29% Similarity=0.358 Sum_probs=13.3
Q ss_pred HHHHCCCCEEEHHHHEE
Q ss_conf 22120311012776301
Q gi|254780886|r 16 AIMSSCSYSWNLKHAIR 32 (41)
Q Consensus 16 aimsscsyswnlkhair 32 (41)
...+|+.||.++++.|-
T Consensus 33 G~VTSg~~Sp~l~k~Ia 49 (90)
T d1vloa1 33 GIITSGTFSPTLGYSIA 49 (90)
T ss_dssp EEEEEEEEETTTTEEEE
T ss_pred EEEECCCCCCCCCCEEE
T ss_conf 88872449985694299
No 3
>d1v0da_ d.4.1.7 (A:) Caspase-activated DNase, CAD (DffB, DFF40) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=5.39 E-value=41 Score=15.09 Aligned_cols=10 Identities=60% Similarity=1.225 Sum_probs=7.6
Q ss_pred EEEHHHHEEE
Q ss_conf 0127763011
Q gi|254780886|r 24 SWNLKHAIRK 33 (41)
Q Consensus 24 swnlkhairk 33 (41)
.|||.|-|.|
T Consensus 174 tWNLDH~IE~ 183 (245)
T d1v0da_ 174 TWNLDHIIEK 183 (245)
T ss_dssp TSEEEESSCT
T ss_pred ECCCCCEEEE
T ss_conf 3166204420
No 4
>d1u0la1 b.40.4.5 (A:3-68) Probable GTPase EngC (YjeQ), N-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=3.74 E-value=1.5e+02 Score=12.62 Aligned_cols=29 Identities=10% Similarity=0.274 Sum_probs=16.4
Q ss_pred CCCCCEEEEEHHHHHHHH-------HCCCCEEEHHH
Q ss_conf 986403630201001221-------20311012776
Q gi|254780886|r 1 MNAKGLIVASIISSTAIM-------SSCSYSWNLKH 29 (41)
Q Consensus 1 mnakglivasiisstaim-------sscsyswnlkh 29 (41)
|+.+|+++++.-+.-.+- -.|...=+|++
T Consensus 1 m~~~G~Vi~~~~~~y~V~~~e~g~~~~c~~rG~lr~ 36 (66)
T d1u0la1 1 LRRRGIVVSFHSNMVTVEDEETGERILCKLRGKFRL 36 (66)
T ss_dssp CCEEEEEEEEETTEEEEEETTTCCEEEEEECGGGTT
T ss_pred CCEEEEEEEEECCEEEEEECCCCCEEEEEEECCCCC
T ss_conf 970389999989999999889995999996220602
No 5
>d1pj5a1 b.44.2.1 (A:743-830) N,N-dimethylglycine oxidase, C-terminal domain {Arthrobacter globiformis [TaxId: 1665]}
Probab=3.30 E-value=84 Score=13.71 Aligned_cols=17 Identities=18% Similarity=0.495 Sum_probs=12.0
Q ss_pred HHHHCCCCEEEHHHHEE
Q ss_conf 22120311012776301
Q gi|254780886|r 16 AIMSSCSYSWNLKHAIR 32 (41)
Q Consensus 16 aimsscsyswnlkhair 32 (41)
...+|+.||..++..|-
T Consensus 30 G~vTS~~~Sp~l~k~Ia 46 (88)
T d1pj5a1 30 GYVTSAAYGYTVAKPIA 46 (88)
T ss_dssp EECCSEEEETTTTEEEE
T ss_pred EEEECCEECCHHCCCEE
T ss_conf 99978729724604369
No 6
>d1wosa1 b.44.2.1 (A:279-361) Glycine cleavage system T protein, GcvT {Thermotoga maritima [TaxId: 2336]}
Probab=3.18 E-value=82 Score=13.74 Aligned_cols=16 Identities=25% Similarity=0.277 Sum_probs=11.9
Q ss_pred HHHCCCCEEEHHHHEE
Q ss_conf 2120311012776301
Q gi|254780886|r 17 IMSSCSYSWNLKHAIR 32 (41)
Q Consensus 17 imsscsyswnlkhair 32 (41)
.++|+.||..|++.|-
T Consensus 29 ~vTSg~~Sp~l~k~Ia 44 (83)
T d1wosa1 29 EITSGNFSPTLGKSIA 44 (83)
T ss_dssp EEEEEEEETTTTEEEE
T ss_pred EEECCCCCCCCCCEEE
T ss_conf 8857609997896389
No 7
>d1iaza_ b.97.1.1 (A:) Equinatoxin II (eqtII, tenebrosin C) {European sea anemone (Actinia equina) [TaxId: 6106]}
Probab=3.15 E-value=85 Score=13.66 Aligned_cols=15 Identities=27% Similarity=0.445 Sum_probs=11.8
Q ss_pred HHHHHCCCCEEEHHH
Q ss_conf 122120311012776
Q gi|254780886|r 15 TAIMSSCSYSWNLKH 29 (41)
Q Consensus 15 taimsscsyswnlkh 29 (41)
-|||-|-.|.|||-.
T Consensus 96 LaIMfSVPyDYNlYs 110 (175)
T d1iaza_ 96 LAVLFSVPYDYNWYS 110 (175)
T ss_dssp EEEEEEECSCTTTCC
T ss_pred EEEEEECCCCHHHHH
T ss_conf 999995675256644
No 8
>d1z0sa1 e.52.1.1 (A:1-249) Inorganic polyphosphate/ATP-NAD kinase PpnK {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=2.96 E-value=2.1e+02 Score=11.94 Aligned_cols=19 Identities=42% Similarity=0.476 Sum_probs=15.0
Q ss_pred CCCEEEEEHHHHHHHHHCC
Q ss_conf 6403630201001221203
Q gi|254780886|r 3 AKGLIVASIISSTAIMSSC 21 (41)
Q Consensus 3 akglivasiisstaimssc 21 (41)
+.|+||+.-..|||..-|+
T Consensus 144 gDGliisTptGSTAY~lSa 162 (249)
T d1z0sa1 144 CDGFIVATQIGSTGYAFSA 162 (249)
T ss_dssp ESEEEEEESGGGGTHHHHT
T ss_pred ECEEEEECCCCCHHHHHHC
T ss_conf 0239982423677889746
No 9
>d1gwya_ b.97.1.1 (A:) Sticholysin II {Carribean sea anemone (Stoichactis helianthus) [TaxId: 6123]}
Probab=2.79 E-value=1e+02 Score=13.28 Aligned_cols=15 Identities=20% Similarity=0.377 Sum_probs=11.3
Q ss_pred HHHHHCCCCEEEHHH
Q ss_conf 122120311012776
Q gi|254780886|r 15 TAIMSSCSYSWNLKH 29 (41)
Q Consensus 15 taimsscsyswnlkh 29 (41)
-|||-|-.|.|||-.
T Consensus 98 LaIMfSVPyDYNlYs 112 (175)
T d1gwya_ 98 LGVMFSVPFDYNWYS 112 (175)
T ss_dssp EEEEEEECSCCSSCC
T ss_pred EEEEEECCCCHHHHH
T ss_conf 999995675256644
No 10
>d1roca_ b.1.22.1 (A:) Anti-silencing protein 1, ASF1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=2.77 E-value=1.1e+02 Score=13.16 Aligned_cols=15 Identities=47% Similarity=0.862 Sum_probs=12.0
Q ss_pred EHHHHHHHHHCCCCE
Q ss_conf 201001221203110
Q gi|254780886|r 10 SIISSTAIMSSCSYS 24 (41)
Q Consensus 10 siisstaimsscsys 24 (41)
.++..|+++-+|+|.
T Consensus 89 dilGvTvillt~~Y~ 103 (155)
T d1roca_ 89 ELVSVTVILLSCSYD 103 (155)
T ss_dssp HHHSCEEEEEEEEET
T ss_pred HCCCCEEEEEEEEEC
T ss_conf 545406999999988
Done!