RPS-BLAST 2.2.22 [Sep-27-2009]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= gi|254780886|ref|YP_003065299.1| hypothetical protein
CLIBASIA_03915 [Candidatus Liberibacter asiaticus str. psy62]
         (41 letters)



>g2gac.1 d.153.1.5 (A:,B:) Glycosylasparaginase
          (aspartylglucosaminidase, AGA) {Flavobacterium
          meningosepticum [TaxId: 238]}
          Length = 275

 Score = 23.8 bits (51), Expect = 4.1
 Identities = 5/33 (15%), Positives = 14/33 (42%)

Query: 9  ASIISSTAIMSSCSYSWNLKHAIRKIEIAIKEQ 41
          A I+     + S +   ++K+ I      +++ 
Sbjct: 65 ACIMDENYNIGSVACMEHIKNPISVARAVMEKT 97


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.318    0.125    0.343 

Gapped
Lambda     K      H
   0.267   0.0553    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 139,798
Number of extensions: 3268
Number of successful extensions: 13
Number of sequences better than 10.0: 1
Number of HSP's gapped: 13
Number of HSP's successfully gapped: 1
Length of query: 41
Length of database: 2,407,596
Length adjustment: 14
Effective length of query: 27
Effective length of database: 2,215,376
Effective search space: 59815152
Effective search space used: 59815152
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 47 (22.3 bits)