RPS-BLAST 2.2.22 [Sep-27-2009] Database: scop70_1_75 13,730 sequences; 2,407,596 total letters Searching..................................................done Query= gi|254780887|ref|YP_003065300.1| hypothetical protein CLIBASIA_03920 [Candidatus Liberibacter asiaticus str. psy62] (86 letters) >d1xtpa_ c.66.1.42 (A:) Hypothetical protein Lmaj004091aaa (LmjF30.0810) {Leishmania major [TaxId: 5664]} Length = 254 Score = 25.7 bits (55), Expect = 1.2 Identities = 10/19 (52%), Positives = 13/19 (68%) Query: 67 PFTYPSRGASSSDLPIKGL 85 P + PS+ ASS +LPI G Sbjct: 2 PGSMPSKEASSRNLPISGR 20 Database: scop70_1_75 Posted date: Mar 27, 2010 6:21 PM Number of letters in database: 2,407,596 Number of sequences in database: 13,730 Lambda K H 0.316 0.132 0.374 Gapped Lambda K H 0.267 0.0535 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 13730 Number of Hits to DB: 295,186 Number of extensions: 11042 Number of successful extensions: 24 Number of sequences better than 10.0: 1 Number of HSP's gapped: 24 Number of HSP's successfully gapped: 2 Length of query: 86 Length of database: 2,407,596 Length adjustment: 51 Effective length of query: 35 Effective length of database: 1,707,366 Effective search space: 59757810 Effective search space used: 59757810 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 47 (22.3 bits)