RPS-BLAST 2.2.22 [Sep-27-2009]

Database: mmdb70 
           33,805 sequences; 4,956,049 total letters

Searching..................................................done

Query= gi|254780888|ref|YP_003065301.1| hypothetical protein
CLIBASIA_03925 [Candidatus Liberibacter asiaticus str. psy62]
         (64 letters)



>1efp_A ETF, protein (electron transfer flavoprotein); electron
           transport, glutaric acidemia type II; HET: FAD AMP;
           2.60A {Paracoccus denitrificans} (A:1-179)
          Length = 179

 Score = 23.8 bits (51), Expect = 8.1
 Identities = 8/44 (18%), Positives = 14/44 (31%)

Query: 3   IRPIHAMDMGRTVVKMSKSGVISEKTGLMSAVIIEPPHIINIIK 46
            RPI+A +  + V       V + +T    A        +    
Sbjct: 123 ERPIYAGNAIQVVKSKDAKKVFTIRTASFDAAGEGGTAPVTETA 166


  Database: mmdb70
    Posted date:  Jun 20, 2010  3:12 AM
  Number of letters in database: 4,956,049
  Number of sequences in database:  33,805
  
Lambda     K      H
   0.330    0.142    0.393 

Gapped
Lambda     K      H
   0.267   0.0651    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33805
Number of Hits to DB: 446,582
Number of extensions: 14284
Number of successful extensions: 54
Number of sequences better than 10.0: 1
Number of HSP's gapped: 54
Number of HSP's successfully gapped: 3
Length of query: 64
Length of database: 4,956,049
Length adjustment: 32
Effective length of query: 32
Effective length of database: 3,874,289
Effective search space: 123977248
Effective search space used: 123977248
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 50 (23.2 bits)