HHsearch alignment for GI: 254780889 and conserved domain: COG0517
>COG0517 FOG: CBS domain [General function prediction only].
Probab=99.33 E-value=8.1e-12 Score=104.21 Aligned_cols=105 Identities=42% Similarity=0.663 Sum_probs=94.0
Q ss_pred CCCEEEECCCCHHHHHHHHHHHCCCCEEEECCCCEEEEEEEEHHHHCCCC--CCCC--CCCCCCCCCCCCCCCCCCHHHH
Q ss_conf 28789946543034565667605041678668860278872354500143--4467--2440026786325730358999
Q gi|254780889|r 100 VNPVTISPYATLADALALMKKYSISGIPVVESDVGKLVGILTNRDVRFAS--NAQQ--AVGELMTRNLITVKKTVNLENA 175 (493)
Q Consensus 100 ~dPVti~pd~TI~ea~~lm~~~~is~iPVVD~~~gkLiGIVT~rDir~~~--~~~~--~V~eiMt~~litv~~~~~l~eA 175 (493)
T Consensus 7 ~~~~~v~~~~~~~~a~~~m~~~~~~~~~v~~~~--~l~Giit~~di~~~~~~~~~~~~~v~~i~~~~~~~~~~~~~~~~~ 84 (117)
T COG0517 7 KDVITVKPDTSVRDALLLMSENGVSAVPVVDDG--KLVGIITERDILRALAAGGKRLLPVKEVMTKPVVTVDPDTPLEEA 84 (117)
T ss_pred CCCEEECCCCCHHHHHHHHHHCCCEEEEEEECC--EEEEEEEHHHHHHHHHCCCCCCCHHHHHHCCCCEEECCCCCHHHH
T ss_conf 688089899819999999987493389974399--999999989998766416655331788625884677799889999
Q ss_pred HHHHHH-CCCCEEEEECCCC-CEEEEEEECCCH
Q ss_conf 999986-5533064574799-786889802100
Q gi|254780889|r 176 KALLHQ-HRIEKLLVVDDDG-CCIGLITVKDIE 206 (493)
Q Consensus 176 ~~iM~~-~ki~~LPVVDe~g-~LvGIIT~~DIl 206 (493)
T Consensus 85 ~~~m~~~~~~~~lpVv~~~~~~lvGivt~~di~ 117 (117)
T COG0517 85 LELMVERHKIRRLPVVDDDGGKLVGIITLSDIL 117 (117)
T ss_pred HHHHHHHCCCCEEEEEECCCCEEEEEEEHHHCC
T ss_conf 999987267762569988988799898878749