HHsearch alignment for GI: 254780889 and conserved domain: COG1253
>COG1253 TlyC Hemolysins and related proteins containing CBS domains [General function prediction only].
Probab=97.16 E-value=0.0027 Score=43.07 Aligned_cols=76 Identities=25% Similarity=0.389 Sum_probs=60.7
Q ss_pred EEEEEHHHHC----CCCCCCCCCCCCCC--CCCCCCCCCCCHHHHHHHHHHCCCCEEEEEC-CCCCEEEEEEECCCHHCC
Q ss_conf 8872354500----14344672440026--7863257303589999999865533064574-799786889802100010
Q gi|254780889|r 137 VGILTNRDVR----FASNAQQAVGELMT--RNLITVKKTVNLENAKALLHQHRIEKLLVVD-DDGCCIGLITVKDIERSQ 209 (493)
Q Consensus 137 iGIVT~rDir----~~~~~~~~V~eiMt--~~litv~~~~~l~eA~~iM~~~ki~~LPVVD-e~g~LvGIIT~~DIlk~~ 209 (493)
T Consensus 186 ~g~~~~~E~~mi~~v~~l~~~~v~eiMtPR~~i~~l~~~~~~~~~~~~~~~~~~SR~PV~~~~~D~iiGiv~~Kdll~~~ 265 (429)
T COG1253 186 EGVLEEEEREMINNVLDLDDRTVREIMTPRTDIVALDLTDTVEELIELILESGHSRIPVYDGDLDNIIGIVHVKDLLRAL 265 (429)
T ss_pred CCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCEEEECCCCCHHHHHHHHHHCCCCEEEEEECCCCCEEEEEEHHHHHHHH
T ss_conf 68628899999996502137562617603155799418999999999997589865878857998378886899999764
Q ss_pred CCC
Q ss_conf 174
Q gi|254780889|r 210 LNP 212 (493)
Q Consensus 210 ~~p 212 (493)
T Consensus 266 ~~~ 268 (429)
T COG1253 266 LDG 268 (429)
T ss_pred HCC
T ss_conf 315