HHsearch alignment for GI: 254780889 and conserved domain: COG2524

>COG2524 Predicted transcriptional regulator, contains C-terminal CBS domains [Transcription].

Probab=99.74  E-value=6.2e-18  Score=148.06  Aligned_cols=114  Identities=32%  Similarity=0.510  Sum_probs=105.2

Q ss_pred             HCCCEECCCEEEECCCCHHHHHHHHHHHCCCCEEEECCCCEEEEEEEEHHHHC---CCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             23881528789946543034565667605041678668860278872354500---143446724400267863257303
Q gi|254780889|r   94 FESGMVVNPVTISPYATLADALALMKKYSISGIPVVESDVGKLVGILTNRDVR---FASNAQQAVGELMTRNLITVKKTV  170 (493)
Q Consensus        94 ~e~gmI~dPVti~pd~TI~ea~~lm~~~~is~iPVVD~~~gkLiGIVT~rDir---~~~~~~~~V~eiMt~~litv~~~~  170 (493)
T Consensus       174 V~~~~s~~~i~v~~d~tl~eaak~f~~~~i~GaPVvd~d--k~vGiit~~dI~~aia~g~~~~kV~~~M~k~vitI~eDe  251 (294)
T COG2524         174 VKNLMSKKLITVRPDDTLREAAKLFYEKGIRGAPVVDDD--KIVGIITLSDIAKAIANGNLDAKVSDYMRKNVITINEDE  251 (294)
T ss_pred             HHHHCCCCCEEECCCCCHHHHHHHHHHCCCCCCCEECCC--CEEEEEEHHHHHHHHHCCCCCCCHHHHHCCCCCEECCCH
T ss_conf             666266784676688639999999997286678510289--458999889999999768965438887505770475730


Q ss_pred             CHHHHHHHHHHCCCCEEEEECCCCCEEEEEEECCCHHCC
Q ss_conf             589999999865533064574799786889802100010
Q gi|254780889|r  171 NLENAKALLHQHRIEKLLVVDDDGCCIGLITVKDIERSQ  209 (493)
Q Consensus       171 ~l~eA~~iM~~~ki~~LPVVDe~g~LvGIIT~~DIlk~~  209 (493)
T Consensus       252 ~i~dAir~M~~~nVGRLlV~ds~gkpvGiITrTDIL~~i  290 (294)
T COG2524         252 DIYDAIRLMNKNNVGRLLVTDSNGKPVGIITRTDILTRI  290 (294)
T ss_pred             HHHHHHHHHHHCCCCEEEEECCCCCEEEEEEHHHHHHHH
T ss_conf             499999998763864699984699678788557888886