HHsearch alignment for GI: 254780889 and conserved domain: COG3448
>COG3448 CBS-domain-containing membrane protein [Signal transduction mechanisms].
Probab=99.59 E-value=3.8e-15 Score=128.07 Aligned_cols=149 Identities=22% Similarity=0.314 Sum_probs=117.1
Q ss_pred CCHHHHHHHHHCCCEEEECCCCCHHHHHHHHH--H-HHHH-----CCCEECCCEEEECCCCHHHHHHHHHHHCCCCEEEE
Q ss_conf 68889999997798799978989899999999--8-7422-----38815287899465430345656676050416786
Q gi|254780889|r 58 TDSRLAIAMAQAGGLGVIHRNFSPSEQVAQVH--Q-VKKF-----ESGMVVNPVTISPYATLADALALMKKYSISGIPVV 129 (493)
Q Consensus 58 Te~~MAiamA~~GGiGvIHrn~sie~qa~~V~--k-VKr~-----e~gmI~dPVti~pd~TI~ea~~lm~~~~is~iPVV 129 (493)
T Consensus 204 s~~Dld~aL~~~~E~lDIdrdd-Le~llr~~elqa~~R~~~~LtcadIMSrdVvtv~~~ts~dhA~~ll~~H~ikaLPV~ 282 (382)
T COG3448 204 SSEDLDAALQRLGETLDIDRDD-LERLLRETELQALRRRMGELTCADIMSRDVVTVSTDTSIDHARKLLQEHRIKALPVL 282 (382)
T ss_pred CHHHHHHHHHHCCCEECCCHHH-HHHHHHHHHHHHHHHHHCCCCHHHHCCCCCEECCCCCCHHHHHHHHHHCCCCCCCCC
T ss_conf 8788999999628501578899-999999999999999856430888637453501776775799999997686504532
Q ss_pred CCCCEEEEEEEEHHHHCCC----------CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCEEEE
Q ss_conf 6886027887235450014----------344672440026786325730358999999986553306457479978688
Q gi|254780889|r 130 ESDVGKLVGILTNRDVRFA----------SNAQQAVGELMTRNLITVKKTVNLENAKALLHQHRIEKLLVVDDDGCCIGL 199 (493)
Q Consensus 130 D~~~gkLiGIVT~rDir~~----------~~~~~~V~eiMt~~litv~~~~~l~eA~~iM~~~ki~~LPVVDe~g~LvGI 199 (493)
T Consensus 283 d~~-~rl~GiVt~~dl~~~a~~~p~qrlr~~~~~~vk~imt~~v~tv~pdtpa~~lvp~lad~g~H~lpvld~~g~lvGI 361 (382)
T COG3448 283 DEH-RRLVGIVTQRDLLKHARPSPFQRLRFLRPPTVKGIMTTPVVTVRPDTPAVELVPRLADEGLHALPVLDAAGKLVGI 361 (382)
T ss_pred CCC-CCEEEEEEHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHCCCCCEEEEECCCCCEEEE
T ss_conf 666-6100324488776016856677753159986344345763353589708888887613773136688688838888
Q ss_pred EEECCCHHC
Q ss_conf 980210001
Q gi|254780889|r 200 ITVKDIERS 208 (493)
Q Consensus 200 IT~~DIlk~ 208 (493)
T Consensus 362 vsQtDliaa 370 (382)
T COG3448 362 VSQTDLIAA 370 (382)
T ss_pred EEHHHHHHH
T ss_conf 627889999