HHsearch alignment for GI: 254780889 and conserved domain: PRK07259
>PRK07259 dihydroorotate dehydrogenase 1B; Reviewed.
Probab=98.69 E-value=1e-06 Score=67.66 Aligned_cols=169 Identities=24% Similarity=0.284 Sum_probs=108.2
Q ss_pred CHHHHHHHHHHHC-CCCEEEEECC--CC--------HH-HHHHHHHHHHHHHCCCCCEE---CCCCCC-HHHHHHHHHCC
Q ss_conf 0156789998731-3666998248--41--------13-88999999999857987245---146469-99999998548
Q gi|254780889|r 232 KDIADRVGPLFDV-NVDLVVVDTA--HG--------HS-QKVLDAVVQIKKNFPSLLVM---AGNIAT-AEGALALIDAG 295 (493)
Q Consensus 232 ~d~~eRa~~Lvea-GvDviviD~a--hG--------h~-~~~~~~i~~~k~~~~~~~ii---~GNv~t-~~~~~~l~~~G 295 (493)
T Consensus 104 ~d~~~~~~~l~~~~~ad~ielNiScPn~~~~g~~~~~~~~~l~~i~~~v~~~~-~~Pv~vKlsP~~~~i~~ia~~~~~~g 182 (301)
T PRK07259 104 EEYVEVAEKLSKAPNVDAIELNISCPNVKHGGMAFGTDPELAYEVVKAVKSVS-KVPVIVKLTPNVTDIVEIAKAAEEAG 182 (301)
T ss_pred HHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHCCCCHHHHHHHHHHHHHHC-CCCEEEEECCCHHHHHHHHHHHHHCC
T ss_conf 89999999864556888899965478888526660879999999999998734-89779980787121999999999759
Q ss_pred CCEEEEEEC-CC---CCCCCCHHCCCCCCCCH-------HHHHHHHHHHCCCCEEEEECCCCCHHHHEEEEEECCCEEEE
Q ss_conf 758996102-78---76653100015743100-------37889998622698199726543777621336714878993
Q gi|254780889|r 296 ADIIKVGIG-PG---SICTTRVVTGVGCPQLS-------AIMSVVEVAERAGVAIVADGGIRFSGDIAKAIAAGSACVMI 364 (493)
Q Consensus 296 ad~ikvGig-~G---s~CtTr~~~g~g~pq~~-------av~~~~~~~~~~~~~iiadGGi~~~gdi~kAla~GA~~VM~ 364 (493)
T Consensus 183 adgvv~~Nt~~~~~id~~~~~p~~~~~~GGlSG~~l~~~al~~v~~~~~~~~ipIig~GGI~s~~da~e~i~aGAs~VQv 262 (301)
T PRK07259 183 ADGLSLINTLKGMAIDIKTRKPILANVTGGLSGPAIKPIALRMVYQVAKAVDIPIIGMGGISTAEDAIEFMMAGASAVQV 262 (301)
T ss_pred CCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHCCCCHHHH
T ss_conf 98899956776765323567743357888634733518999999999851698889767979999999999839879872
Q ss_pred CCHHHCCCCCCCCEEEECCEEEEEEECCCCHHHHHHCCHHHHCCCCCCCCCCEECCCCEEEEECCCCHHHHHHHHHHHHH
Q ss_conf 23010121677644873680588873320068875221222101233343310045402662105758998999999999
Q gi|254780889|r 365 GSLLAGTDESPGDIFLYQGRSFKSYRGMGSVAAMERGSSARYSQDGVTDVLKLVPEGIEGRVPYKGPIASVLHQMSGGLK 444 (493)
Q Consensus 365 G~~~agt~Espg~~~~~~g~~~K~yrGm~S~~A~~~~~~~ry~~~~~~~~~k~v~eGv~~~v~~~G~~~~~~~~~~~glr 444 (493)
T Consensus 263 ~Tav--------------------~~Gp-----------------------------------------~~~~~i~~~L~ 281 (301)
T PRK07259 263 GTAN--------------------FIDP-----------------------------------------YAFPEIIEGLE 281 (301)
T ss_pred HHHH--------------------HCCC-----------------------------------------HHHHHHHHHHH
T ss_conf 1233--------------------1490-----------------------------------------69999999999
Q ss_pred HHHHHCCCCCHHHHHHCC
Q ss_conf 855515758776897375
Q gi|254780889|r 445 SSMGYVGASNIEEFQKKA 462 (493)
Q Consensus 445 s~~~y~G~~~i~e~~~~~ 462 (493)
T Consensus 282 ~~l~~~G~~si~e~~G~a 299 (301)
T PRK07259 282 AYLDEEGIKSIEEIIGIA 299 (301)
T ss_pred HHHHHCCCCCHHHHHCHH
T ss_conf 999984999899971813