HHsearch alignment for GI: 254780889 and conserved domain: PRK07259

>PRK07259 dihydroorotate dehydrogenase 1B; Reviewed.
Probab=98.69  E-value=1e-06  Score=67.66  Aligned_cols=169  Identities=24%  Similarity=0.284  Sum_probs=108.2

Q ss_pred             CHHHHHHHHHHHC-CCCEEEEECC--CC--------HH-HHHHHHHHHHHHHCCCCCEE---CCCCCC-HHHHHHHHHCC
Q ss_conf             0156789998731-3666998248--41--------13-88999999999857987245---146469-99999998548
Q gi|254780889|r  232 KDIADRVGPLFDV-NVDLVVVDTA--HG--------HS-QKVLDAVVQIKKNFPSLLVM---AGNIAT-AEGALALIDAG  295 (493)
Q Consensus       232 ~d~~eRa~~Lvea-GvDviviD~a--hG--------h~-~~~~~~i~~~k~~~~~~~ii---~GNv~t-~~~~~~l~~~G  295 (493)
T Consensus       104 ~d~~~~~~~l~~~~~ad~ielNiScPn~~~~g~~~~~~~~~l~~i~~~v~~~~-~~Pv~vKlsP~~~~i~~ia~~~~~~g  182 (301)
T PRK07259        104 EEYVEVAEKLSKAPNVDAIELNISCPNVKHGGMAFGTDPELAYEVVKAVKSVS-KVPVIVKLTPNVTDIVEIAKAAEEAG  182 (301)
T ss_pred             HHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHCCCCHHHHHHHHHHHHHHC-CCCEEEEECCCHHHHHHHHHHHHHCC
T ss_conf             89999999864556888899965478888526660879999999999998734-89779980787121999999999759


Q ss_pred             CCEEEEEEC-CC---CCCCCCHHCCCCCCCCH-------HHHHHHHHHHCCCCEEEEECCCCCHHHHEEEEEECCCEEEE
Q ss_conf             758996102-78---76653100015743100-------37889998622698199726543777621336714878993
Q gi|254780889|r  296 ADIIKVGIG-PG---SICTTRVVTGVGCPQLS-------AIMSVVEVAERAGVAIVADGGIRFSGDIAKAIAAGSACVMI  364 (493)
Q Consensus       296 ad~ikvGig-~G---s~CtTr~~~g~g~pq~~-------av~~~~~~~~~~~~~iiadGGi~~~gdi~kAla~GA~~VM~  364 (493)
T Consensus       183 adgvv~~Nt~~~~~id~~~~~p~~~~~~GGlSG~~l~~~al~~v~~~~~~~~ipIig~GGI~s~~da~e~i~aGAs~VQv  262 (301)
T PRK07259        183 ADGLSLINTLKGMAIDIKTRKPILANVTGGLSGPAIKPIALRMVYQVAKAVDIPIIGMGGISTAEDAIEFMMAGASAVQV  262 (301)
T ss_pred             CCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHCCCCHHHH
T ss_conf             98899956776765323567743357888634733518999999999851698889767979999999999839879872


Q ss_pred             CCHHHCCCCCCCCEEEECCEEEEEEECCCCHHHHHHCCHHHHCCCCCCCCCCEECCCCEEEEECCCCHHHHHHHHHHHHH
Q ss_conf             23010121677644873680588873320068875221222101233343310045402662105758998999999999
Q gi|254780889|r  365 GSLLAGTDESPGDIFLYQGRSFKSYRGMGSVAAMERGSSARYSQDGVTDVLKLVPEGIEGRVPYKGPIASVLHQMSGGLK  444 (493)
Q Consensus       365 G~~~agt~Espg~~~~~~g~~~K~yrGm~S~~A~~~~~~~ry~~~~~~~~~k~v~eGv~~~v~~~G~~~~~~~~~~~glr  444 (493)
T Consensus       263 ~Tav--------------------~~Gp-----------------------------------------~~~~~i~~~L~  281 (301)
T PRK07259        263 GTAN--------------------FIDP-----------------------------------------YAFPEIIEGLE  281 (301)
T ss_pred             HHHH--------------------HCCC-----------------------------------------HHHHHHHHHHH
T ss_conf             1233--------------------1490-----------------------------------------69999999999


Q ss_pred             HHHHHCCCCCHHHHHHCC
Q ss_conf             855515758776897375
Q gi|254780889|r  445 SSMGYVGASNIEEFQKKA  462 (493)
Q Consensus       445 s~~~y~G~~~i~e~~~~~  462 (493)
T Consensus       282 ~~l~~~G~~si~e~~G~a  299 (301)
T PRK07259        282 AYLDEEGIKSIEEIIGIA  299 (301)
T ss_pred             HHHHHCCCCCHHHHHCHH
T ss_conf             999984999899971813