HHsearch alignment for GI: 254780889 and conserved domain: PRK10070
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional.
Probab=97.53 E-value=0.0018 Score=44.37 Aligned_cols=97 Identities=13% Similarity=0.168 Sum_probs=67.1
Q ss_pred HHHHHHHHCCCCEEEECCC--------------CEEEEEEEEHHHH----------CCCCCCC----CCCCCCCCCCCCC
Q ss_conf 5656676050416786688--------------6027887235450----------0143446----7244002678632
Q gi|254780889|r 114 ALALMKKYSISGIPVVESD--------------VGKLVGILTNRDV----------RFASNAQ----QAVGELMTRNLIT 165 (493)
Q Consensus 114 a~~lm~~~~is~iPVVD~~--------------~gkLiGIVT~rDi----------r~~~~~~----~~V~eiMt~~lit 165 (493)
T Consensus 207 l~~L~~~~~~TiifVTHDl~eA~~laDRIaVM~~G~Ivq~GtpeeI~~~Pa~~yV~~F~~~v~~~~~~~a~~i~~~~~~~ 286 (400)
T PRK10070 207 LVKLQAKHQRTIVFISHDLDEAMRIGDRIAIMQNGEVVQVGTPDEILNNPANDYVRTFFRGVDISQVFSAKDIARRTPNG 286 (400)
T ss_pred HHHHHHHHCCEEEEECCCHHHHHHHCCEEEEEECCEEEEECCHHHHHHCCCCHHHHHHHCCCCHHHCEEHHHHHCCCCCC
T ss_conf 99999985999999899999999869999999898899972889998679986899875547787702398962468752
Q ss_pred C---CCCCCHHHHHHHHHHCCCCEEEEECCCCCEEEEEEECCCHHCCC
Q ss_conf 5---73035899999998655330645747997868898021000101
Q gi|254780889|r 166 V---KKTVNLENAKALLHQHRIEKLLVVDDDGCCIGLITVKDIERSQL 210 (493)
Q Consensus 166 v---~~~~~l~eA~~iM~~~ki~~LPVVDe~g~LvGIIT~~DIlk~~~ 210 (493)
T Consensus 287 ~~~~~~~~~~~~al~~m~~~~~~~~~vvd~~~~~~G~v~~~~~~~~~~ 334 (400)
T PRK10070 287 LIRKTPGFGPRSALKLLQDEDREYGYVIERGNKFVGAVSIDSLKAALT 334 (400)
T ss_pred EEECCCCCCHHHHHHHHHHCCCCEEEEECCCCEEEEEEEHHHHHHHHH
T ss_conf 131488869999999998559867999869980889988999997763