HHsearch alignment for GI: 254780889 and conserved domain: TIGR00393
>TIGR00393 kpsF sugar isomerase, KpsF/GutQ family; InterPro: IPR004800 This is a family of closely related proteins with the phosphosugar-binding domain SIS (Sugar ISomerase) followed by two copies of the CBS (named after Cystathionine Beta Synthase) domain. The group includes GutQ, a protein of the glucitol operon and KpsF, a virulence factor involved in capsular polysialic acid biosynthesis in some pathogenic strains of Escherichia coli.; GO: 0016853 isomerase activity, 0005975 carbohydrate metabolic process.
Probab=99.22 E-value=1.9e-11 Score=101.61 Aligned_cols=120 Identities=28% Similarity=0.416 Sum_probs=101.8
Q ss_pred CCCCHHHHHH----------HHHHHHHHCCCEEC-CCE-EEECCCCHHHHHHHHHHHCCCCEEEECCCCEEEEEEEEHHH
Q ss_conf 8989899999----------99987422388152-878-99465430345656676050416786688602788723545
Q gi|254780889|r 77 RNFSPSEQVA----------QVHQVKKFESGMVV-NPV-TISPYATLADALALMKKYSISGIPVVESDVGKLVGILTNRD 144 (493)
Q Consensus 77 rn~sie~qa~----------~V~kVKr~e~gmI~-dPV-ti~pd~TI~ea~~lm~~~~is~iPVVD~~~gkLiGIVT~rD 144 (493)
T Consensus 133 rnF~~eDFA~~HPGG~LG~kLL~kV~---dlm~t~d~lP~v~~tas~~DAL~e~~~~~LG~~~v~~~~-~~~~Gv~tDGD 208 (272)
T TIGR00393 133 RNFSEEDFAKFHPGGALGRKLLVKVK---DLMQTDDELPLVAPTASFKDALLEMSRKRLGLAVVCDEN-EQLKGVFTDGD 208 (272)
T ss_pred CCCCHHHHHCCCCCHHHHHHHHHHHH---HHHCCCCCCCCEECCCCCEEEEEEEECCCCCEEEEEECC-CCEEEEEECCH
T ss_conf 58884244114870466678888767---764066567822236772021023313786179997155-52467871465
Q ss_pred HCC------CCCCCCCCCCCCCCCCCCCC-CCCCHHHHHHHHHHCCCCEEEEECCCCCEEEEE
Q ss_conf 001------43446724400267863257-303589999999865533064574799786889
Q gi|254780889|r 145 VRF------ASNAQQAVGELMTRNLITVK-KTVNLENAKALLHQHRIEKLLVVDDDGCCIGLI 200 (493)
Q Consensus 145 ir~------~~~~~~~V~eiMt~~litv~-~~~~l~eA~~iM~~~ki~~LPVVDe~g~LvGII 200 (493)
T Consensus 209 ~RR~l~~~g~~~l~~~v~~~mT~~p~~~~n~~~~l~~A~~~l~~~kI~~~~vvdd~nkl~G~~ 271 (272)
T TIGR00393 209 LRRVLALLGGGALKKEVKDFMTLGPKTLKNSDELLVEALEFLKKRKITSLVVVDDENKLLGVL 271 (272)
T ss_pred HHHHHHHHCCHHCCCCHHHHCCCCCEEEECHHHHHHHHHHHHHHCCCEEEEEECCCCEEEEEE
T ss_conf 999998816600023122210688813401456899999998727942899983897178753