HHsearch alignment for GI: 254780889 and conserved domain: cd02205

>cd02205 CBS_pair The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-called Bateman domain or a CBS pair based on crystallographic studies in bacteria. The CBS pair was used as a basis for this cd hierarchy since the human CBS proteins can adopt the typical core structure and form an intramolecular CBS pair. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains and this has been used to help in its classification here. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown. Mutations of conserved residues within this domain are associated with a variety of human hereditary diseases, including congenital myotonia, idiopathic generali
Probab=99.50  E-value=1.2e-13  Score=117.36  Aligned_cols=108  Identities=46%  Similarity=0.714  Sum_probs=96.4

Q ss_pred             CCCEEEECCCCHHHHHHHHHHHCCCCEEEECCCCEEEEEEEEHHHHCCC-----CCCCCCCCCCCCCCCCCCCCCCCHHH
Q ss_conf             2878994654303456566760504167866886027887235450014-----34467244002678632573035899
Q gi|254780889|r  100 VNPVTISPYATLADALALMKKYSISGIPVVESDVGKLVGILTNRDVRFA-----SNAQQAVGELMTRNLITVKKTVNLEN  174 (493)
Q Consensus       100 ~dPVti~pd~TI~ea~~lm~~~~is~iPVVD~~~gkLiGIVT~rDir~~-----~~~~~~V~eiMt~~litv~~~~~l~e  174 (493)
T Consensus         1 ~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~-~~~~G~it~~dl~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~   79 (113)
T cd02205           1 RDVVTVSPDDTVAEALRLMLEHGISGLPVVDDD-GRLVGIVTERDLLRALAEGGLDPLVTVGDVMTRDVVTVSPDTSLEE   79 (113)
T ss_pred             CCCEEECCCCCHHHHHHHHHHCCCEEEEEECCC-CCEEEEEEHHHHHHHHHHCCCCCCCCEEEEEECCCEEEEECCHHHH
T ss_conf             997796892989999999998398099999399-9599999889989887631574103304567505468973211779


Q ss_pred             HHHHHHHCCCCEEEEECCCCCEEEEEEECCCHHC
Q ss_conf             9999986553306457479978688980210001
Q gi|254780889|r  175 AKALLHQHRIEKLLVVDDDGCCIGLITVKDIERS  208 (493)
Q Consensus       175 A~~iM~~~ki~~LPVVDe~g~LvGIIT~~DIlk~  208 (493)
T Consensus        80 ~~~~~~~~~~~~~~Vvd~~~~~iG~vs~~di~~~  113 (113)
T cd02205          80 AAELMLEHGIRRLPVVDDEGRLVGIVTRSDILRA  113 (113)
T ss_pred             HHHHHHHCCCEEEEEEECCCEEEEEEEHHHHHCC
T ss_conf             9999998497299999669979999988997469