>cd02811 IDI-2_FMN Isopentenyl-diphosphate:dimethylallyl diphosphate isomerase type 2 (IDI-2) FMN-binding domain. Two types of IDIs have been characterized at present. The long known IDI-1 is only dependent on divalent metals for activity, whereas IDI-2 requires a metal, FMN and NADPH. IDI-2 catalyzes the interconversion of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP) in the mevalonate pathway.

Probab=99.73 E-value=3.4e-16 Score=135.56 Aligned_cols=145 Identities=27% Similarity=0.393 Sum_probs=113.5 Q ss_pred HHHHHHHHHHHHCCCCCEECCCC---CCHHHHHHHHHCCCCEEEEEECCC----CCCCCCHH----------CCCCCCCC Q ss_conf 89999999998579872451464---699999999854875899610278----76653100----------01574310 Q gi|254780889|r 260 KVLDAVVQIKKNFPSLLVMAGNI---ATAEGALALIDAGADIIKVGIGPG----SICTTRVV----------TGVGCPQL 322 (493) Q Consensus 260 ~~~~~i~~~k~~~~~~~ii~GNv---~t~~~~~~l~~~Gad~ikvGig~G----s~CtTr~~----------~g~g~pq~ 322 (493) T Consensus 165 ~~~~~I~~l~~~~~-vPVIvKeVG~Gis~eda~~l~~~Gv~~IdVSghGGTnf~~IE~~R~~d~~~~~~~~l~dwGi~T~ 243 (326) T cd02811 165 GWLERIEELVKALS-VPVIVKEVGFGISRETAKRLADAGVKAIDVAGAGGTSWARVENYRAKDSDQRLAEYFADWGIPTA 243 (326) T ss_pred HHHHHHHHHHHHCC-CCEEEEECCCCCCHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHCCCCCCHHHHHHHHHCCCCHH T ss_conf 89999999998479-98588524789999999999967999999789999753665310156731337889886285569 Q ss_pred HHHHHHHHHHHCCCCEEEEECCCCCHHHHEEEEEECCCEEEECCHHHCCCCCCCCEEEECCEEEEEEECCCCHHHHHHCC Q ss_conf 03788999862269819972654377762133671487899323010121677644873680588873320068875221 Q gi|254780889|r 323 SAIMSVVEVAERAGVAIVADGGIRFSGDIAKAIAAGSACVMIGSLLAGTDESPGDIFLYQGRSFKSYRGMGSVAAMERGS 402 (493) Q Consensus 323 ~av~~~~~~~~~~~~~iiadGGi~~~gdi~kAla~GA~~VM~G~~~agt~Espg~~~~~~g~~~K~yrGm~S~~A~~~~~ 402 (493) T Consensus 244 ~sL~e~~~~~~--~~~iiasGGir~g~Dv~KalaLGA~~vgiar~~L~~~~----------------------------- 292 (326) T cd02811 244 ASLLEVRSALP--DLPLIASGGIRNGLDIAKALALGADLVGMAGPFLKAAL----------------------------- 292 (326) T ss_pred HHHHHHHHHCC--CCEEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHH----------------------------- T ss_conf 99999997389--98199868878779999999955533652799999985----------------------------- Q ss_pred HHHHCCCCCCCCCCEECCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHH Q ss_conf 2221012333433100454026621057589989999999998555157587768973 Q gi|254780889|r 403 SARYSQDGVTDVLKLVPEGIEGRVPYKGPIASVLHQMSGGLKSSMGYVGASNIEEFQK 460 (493) Q Consensus 403 ~~ry~~~~~~~~~k~v~eGv~~~v~~~G~~~~~~~~~~~glrs~~~y~G~~~i~e~~~ 460 (493) T Consensus 293 -----------------~G~~-------~v~~~l~~~~~el~~~M~l~G~~~i~eLr~ 326 (326) T cd02811 293 -----------------EGEE-------AVIETIEQIIEELRTAMFLTGAKNLAELKQ 326 (326) T ss_pred -----------------CCHH-------HHHHHHHHHHHHHHHHHHHHCCCCHHHHCC T ss_conf -----------------4899-------999999999999999999868998899748

HHsearch alignment for GI: 254780889 and conserved domain: cd02811