HHsearch alignment for GI: 254780889 and conserved domain: cd04607
>cd04607 CBS_pair_NTP_transferase_assoc This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domain associated with the NTP (Nucleotidyl transferase) domain downstream. CBS is a small domain originally identified in cystathionine beta-synthase and subsequently found in a wide range of different proteins. CBS domains usually come in tandem repeats, which associate to form a so-called Bateman domain or a CBS pair which is reflected in this model. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown.
Probab=98.26 E-value=3.9e-06 Score=63.40 Aligned_cols=46 Identities=26% Similarity=0.434 Sum_probs=24.6
Q ss_pred CCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCEEEEEEECCCHHC
Q ss_conf 6325730358999999986553306457479978688980210001
Q gi|254780889|r 163 LITVKKTVNLENAKALLHQHRIEKLLVVDDDGCCIGLITVKDIERS 208 (493)
Q Consensus 163 litv~~~~~l~eA~~iM~~~ki~~LPVVDe~g~LvGIIT~~DIlk~ 208 (493)
T Consensus 4 pi~v~~~~tl~ea~~~m~~~~~~~~~Vvd~~~~l~GiiT~~Di~r~ 49 (113)
T cd04607 4 QLLVSPDASILDALRKIDKNALRIVLVVDENGRLLGTVTDGDIRRA 49 (113)
T ss_pred CEEECCCCCHHHHHHHHHHCCCCEEEEECCCCEEEEEEECHHHHHH
T ss_conf 8896994989999999987599789999799959999987277668