HHsearch alignment for GI: 254780889 and conserved domain: cd04610

>cd04610 CBS_pair_ParBc_assoc This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with a ParBc (ParB-like nuclease) domain downstream. CBS is a small domain originally identified in cystathionine beta-synthase and subsequently found in a wide range of different proteins. CBS domains usually come in tandem repeats, which associate to form a so-called Bateman domain or a CBS pair which is reflected in this model. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown.
Probab=99.86  E-value=2.8e-21  Score=172.05  Aligned_cols=106  Identities=33%  Similarity=0.582  Sum_probs=100.2

Q ss_pred             CCCEEEECCCCHHHHHHHHHHHCCCCEEEECCCCEEEEEEEEHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf             28789946543034565667605041678668860278872354500143446724400267863257303589999999
Q gi|254780889|r  100 VNPVTISPYATLADALALMKKYSISGIPVVESDVGKLVGILTNRDVRFASNAQQAVGELMTRNLITVKKTVNLENAKALL  179 (493)
Q Consensus       100 ~dPVti~pd~TI~ea~~lm~~~~is~iPVVD~~~gkLiGIVT~rDir~~~~~~~~V~eiMt~~litv~~~~~l~eA~~iM  179 (493)
T Consensus         2 kdvvtv~~d~tv~ea~~~m~~~~~~~~pVvd~--~~lvGivt~~Dll~~-~~~~~v~~iM~~~~~tv~~~~~l~~a~~~m   78 (107)
T cd04610           2 RDVITVSPDNTVKDVIKLIKETGHDGFPVVDN--GKVVGIVSARDLLGK-DPDETVEEIMSKDLVVAVPEMDIMDAARVM   78 (107)
T ss_pred             CCCEEECCCCCHHHHHHHHHHHCCCEEEEEEC--CEEEEEEEHHHHCCC-CCCCCHHHHCCCCCCCCCCCCCHHHHHHHH
T ss_conf             88099899295999999999759978999989--999998876453159-987726786057860169998699999999


Q ss_pred             HHCCCCEEEEECCCCCEEEEEEECCCHHC
Q ss_conf             86553306457479978688980210001
Q gi|254780889|r  180 HQHRIEKLLVVDDDGCCIGLITVKDIERS  208 (493)
Q Consensus       180 ~~~ki~~LPVVDe~g~LvGIIT~~DIlk~  208 (493)
T Consensus        79 ~~~~~~~lpVvde~g~lvGiiT~~Dilra  107 (107)
T cd04610          79 FRTGISKLPVVDENNNLVGIITNTDVIRS  107 (107)
T ss_pred             HHHCCCEEEEECCCCEEEEEEEHHHHHCC
T ss_conf             98299689699239989999994784439