HHsearch alignment for GI: 254780889 and conserved domain: cd04610
>cd04610 CBS_pair_ParBc_assoc This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with a ParBc (ParB-like nuclease) domain downstream. CBS is a small domain originally identified in cystathionine beta-synthase and subsequently found in a wide range of different proteins. CBS domains usually come in tandem repeats, which associate to form a so-called Bateman domain or a CBS pair which is reflected in this model. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown.
Probab=98.34 E-value=2.1e-06 Score=65.38 Aligned_cols=48 Identities=25% Similarity=0.486 Sum_probs=35.8
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCEEEEEEECCCHHC
Q ss_conf 6786325730358999999986553306457479978688980210001
Q gi|254780889|r 160 TRNLITVKKTVNLENAKALLHQHRIEKLLVVDDDGCCIGLITVKDIERS 208 (493)
Q Consensus 160 t~~litv~~~~~l~eA~~iM~~~ki~~LPVVDe~g~LvGIIT~~DIlk~ 208 (493)
T Consensus 1 Tkdvvtv~~d~tv~ea~~~m~~~~~~~~pVvd-~~~lvGivt~~Dll~~ 48 (107)
T cd04610 1 TRDVITVSPDNTVKDVIKLIKETGHDGFPVVD-NGKVVGIVSARDLLGK 48 (107)
T ss_pred CCCCEEECCCCCHHHHHHHHHHHCCCEEEEEE-CCEEEEEEEHHHHCCC
T ss_conf 98809989929599999999975997899998-9999998876453159