HHsearch alignment for GI: 254780889 and conserved domain: cd04632
>cd04632 CBS_pair_19 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-called Bateman domain or a CBS pair based on crystallographic studies in bacteria. The CBS pair was used as a basis for this cd hierarchy since the human CBS proteins can adopt the typical core structure and form an intramolecular CBS pair. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains and this has been used to help in its classification here. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown. Mutations of conserved residues within this domain are associated with a variety of human hereditary diseases, including congenital myotonia, idiopathic gener
Probab=98.56 E-value=7.6e-08 Score=75.69 Aligned_cols=51 Identities=33% Similarity=0.509 Sum_probs=45.8
Q ss_pred CCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCEEEEEEECCCHHCCCC
Q ss_conf 786325730358999999986553306457479978688980210001017
Q gi|254780889|r 161 RNLITVKKTVNLENAKALLHQHRIEKLLVVDDDGCCIGLITVKDIERSQLN 211 (493)
Q Consensus 161 ~~litv~~~~~l~eA~~iM~~~ki~~LPVVDe~g~LvGIIT~~DIlk~~~~ 211 (493)
T Consensus 1 kdvvTv~~~~~l~~a~~lm~~~~i~~lPVvd~~g~lvGiiT~~Dl~~~~~~ 51 (128)
T cd04632 1 EDVITVREDDSVGKAINVLREHGISRLPVVDDNGKLTGIVTRHDIVDFVVR 51 (128)
T ss_pred CCCEEECCCCCHHHHHHHHHHCCCCEEEEECCCCCEEEEEEHHHHHHHHHC
T ss_conf 998698995929999999998399779999689978999988999998853