HHsearch alignment for GI: 254780889 and conserved domain: cd04729
>cd04729 NanE N-acetylmannosamine-6-phosphate epimerase (NanE) converts N-acetylmannosamine-6-phosphate to N-acetylglucosamine-6-phosphate. This reaction is part of the pathway that allows the usage of sialic acid as a carbohydrate source. Sialic acids are a family of related sugars that are found as a component of glycoproteins, gangliosides, and other sialoglycoconjugates.
Probab=98.92 E-value=1.7e-08 Score=80.35 Aligned_cols=128 Identities=23% Similarity=0.423 Sum_probs=96.9
Q ss_pred HHHHHHHHHHCCCCEEEEECCCCH---HHHHHHHHHHHHHHCCCCCEECCCCCCHHHHHHHHHCCCCEEEEEECCCCCCC
Q ss_conf 567899987313666998248411---38899999999985798724514646999999998548758996102787665
Q gi|254780889|r 234 IADRVGPLFDVNVDLVVVDTAHGH---SQKVLDAVVQIKKNFPSLLVMAGNIATAEGALALIDAGADIIKVGIGPGSICT 310 (493)
Q Consensus 234 ~~eRa~~LveaGvDviviD~ahGh---~~~~~~~i~~~k~~~~~~~ii~GNv~t~~~~~~l~~~Gad~ikvGig~Gs~Ct 310 (493)
T Consensus 81 t~~ev~~l~~aGadiIA~DaT~R~RP~g~~l~~~i~~i~~~~-~~l~M-AD~st~ee~~~A~~~G~D~vgTTL-~G---Y 154 (219)
T cd04729 81 TIEEVDALAAAGADIIALDATDRPRPDGETLAELIKRIHEEY-NCLLM-ADISTLEEALNAAKLGFDIIGTTL-SG---Y 154 (219)
T ss_pred CHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHH-CCEEE-EECCCHHHHHHHHHCCCCEEECCC-CC---C
T ss_conf 899999999859999999467887989978999999999986-97788-754889999999984998997021-45---6
Q ss_pred CCHHCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCHHHHEEEEEECCCEEEECCHHHC
Q ss_conf 310001574310037889998622698199726543777621336714878993230101
Q gi|254780889|r 311 TRVVTGVGCPQLSAIMSVVEVAERAGVAIVADGGIRFSGDIAKAIAAGSACVMIGSLLAG 370 (493)
Q Consensus 311 Tr~~~g~g~pq~~av~~~~~~~~~~~~~iiadGGi~~~gdi~kAla~GA~~VM~G~~~ag 370 (493)
T Consensus 155 T~~t~~~~~PD~~lv~~l~~~---~~~pvIaEGri~tPe~a~~a~~~GA~aVVVGsAITr 211 (219)
T cd04729 155 TEETAKTEDPDFELLKELRKA---LGIPVIAEGRINSPEQAAKALELGADAVVVGSAITR 211 (219)
T ss_pred CCCCCCCCCCCHHHHHHHHHH---CCCCEEEECCCCCHHHHHHHHHCCCCEEEECCCCCC
T ss_conf 778788999878999999997---599399706989999999999839989998954388