RPSBLAST alignment for GI: 254780889 and conserved domain: TIGR00393
>gnl|CDD|129488 TIGR00393, kpsF, KpsF/GutQ family protein. This model describes a number of closely related proteins with the phosphosugar-binding domain SIS (Sugar ISomerase) followed by two copies of the CBS (named after Cystathionine Beta Synthase) domain. One is GutQ, a protein of the glucitol operon. Another is KpsF, a virulence factor involved in capsular polysialic acid biosynthesis in some pathogenic strains of E. coli. Length = 268
Score = 49.8 bits (119), Expect = 2e-06
Identities = 51/194 (26%), Positives = 80/194 (41%), Gaps = 24/194 (12%)
Query: 22 RPEFSNVLPRDIDISTRIAKDFT-LNL-PIMSAAMDQVTDSRLAIAMAQAGGLGVIHRNF 79
P S D + ++ K+ +NL P S + LA+A+ +A RNF
Sbjct: 83 SPNSSLARAADYVLDIKVEKEACPINLAPTTSTTLTLALGDALAVALMRA-------RNF 135
Query: 80 SPSEQVAQVHQ---------VKKFESGMVVNPVTISPYATLADALALMKKYSISGIPVVE 130
S E A H VK + + I+P + DAL M + + G +V
Sbjct: 136 SQ-EDFASFHPGGALGRKLLVKVKDLMQTTDLPLIAPTTSFKDALLEMSEKRL-GSAIVC 193
Query: 131 SDVGKLVGILTNRDVRFASNA----QQAVGELMTRNLITVKKTVNLENAKALLHQHRIEK 186
+ +LVG+ T+ D+R A + V + MT T K L A L + +I
Sbjct: 194 DENNQLVGVFTDGDLRRALLGGGSLKSEVRDFMTLGPKTFKLDALLLEALEFLERRKITS 253
Query: 187 LLVVDDDGCCIGLI 200
L+VVDD +G++
Sbjct: 254 LVVVDDHNKVLGVL 267