RPSBLAST alignment for GI: 254780889 and conserved domain: cd04598

>gnl|CDD|73098 cd04598, CBS_pair_GGDEF_assoc, This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains in association with the GGDEF (DiGuanylate-Cyclase (DGC)) domain. The GGDEF domain has been suggested to be homologous to the adenylyl cyclase catalytic domain and is thought to be involved in regulating cell surface adhesiveness in bacteria. CBS is a small domain originally identified in cystathionine beta-synthase and subsequently found in a wide range of different proteins. CBS domains usually come in tandem repeats, which associate to form a so-called Bateman domain or a CBS pair which is reflected in this model. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown.. Length = 119
 Score = 41.7 bits (98), Expect = 5e-04
 Identities = 27/114 (23%), Positives = 52/114 (45%), Gaps = 14/114 (12%)

Query: 104 TISPYATLADALALMKKYS-ISGIPVVESDVGKLVGILTNRDV--RFASN------AQQA 154
           T+SP  T+ D L   ++   +S + VV  D G+ VG++    +    ++        ++ 
Sbjct: 5   TVSPDTTVNDVLERFERDPDLSALAVV--DDGRPVGLIMREALMELLSTPYGRALYGKKP 62

Query: 155 VGELMTRNLITVKKTVNLENAKALL---HQHRIEKLLVVDDDGCCIGLITVKDI 205
           V E+M  + + V+    LE    L        +    +V ++G  +G+ TVKD+
Sbjct: 63  VSEVMDPDPLIVEADTPLEEVSRLATGRDSQNLYDGFIVTEEGRYLGIGTVKDL 116