RPSBLAST alignment for GI: 254780889 and conserved domain: cd04620
>gnl|CDD|73119 cd04620, CBS_pair_7, The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-called Bateman domain or a CBS pair based on crystallographic studies in bacteria. The CBS pair was used as a basis for this cd hierarchy since the human CBS proteins can adopt the typical core structure and form an intramolecular CBS pair. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains and this has been used to help in its classification here. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown. Mutations of conserved residues within this domain are associated with a variety of human hereditary diseases, including congenital myotonia, idiopathic generalized epilepsy, hypercalciuric nephrolithiasis, and classic Bartter syndrome (CLC chloride channel family members), Wolff-Parkinson-White syndrome (gamma 2 subunit of AMP-activated protein kinase), retinitis pigmentosa (IMP dehydrogenase-1), and homocystinuria (cystathionine beta-synthase).. Length = 115
Score = 66.8 bits (163), Expect = 1e-11
Identities = 42/114 (36%), Positives = 70/114 (61%), Gaps = 10/114 (8%)
Query: 102 PVTISPYATLADALALMKKYSISG-IPVVESDVGKLVGILTNRD-VRFASN----AQQAV 155
P+T++P +ADA+ALM + S + VVE G+L+GI T RD VR + + +
Sbjct: 3 PLTVTPDTPVADAIALMSQQGDSSCVLVVEK--GRLLGIFTERDIVRLTAIGKDLSDLPI 60
Query: 156 GELMTRNLITVKKT--VNLENAKALLHQHRIEKLLVVDDDGCCIGLITVKDIER 207
GE+MT+ ++T++++ ++ A +L QH+I L V+DD G IGL+T + I +
Sbjct: 61 GEVMTQPVVTLQESEIQDIFTALSLFRQHQIRHLPVLDDQGQLIGLVTAESIRQ 114