RPSBLAST alignment for GI: 254780889 and conserved domain: cd04636
>gnl|CDD|73134 cd04636, CBS_pair_23, The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-called Bateman domain or a CBS pair based on crystallographic studies in bacteria. The CBS pair was used as a basis for this cd hierarchy since the human CBS proteins can adopt the typical core structure and form an intramolecular CBS pair. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains and this has been used to help in its classification here. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown. Mutations of conserved residues within this domain are associated with a variety of human hereditary diseases, including congenital myotonia, idiopathic generalized epilepsy, hypercalciuric nephrolithiasis, and classic Bartter syndrome (CLC chloride channel family members), Wolff-Parkinson-White syndrome (gamma 2 subunit of AMP-activated protein kinase), retinitis pigmentosa (IMP dehydrogenase-1), and homocystinuria (cystathionine beta-synthase).. Length = 132
Score = 52.6 bits (126), Expect = 3e-07
Identities = 36/132 (27%), Positives = 65/132 (49%), Gaps = 27/132 (20%)
Query: 102 PVTISPYATLADALALMKKYSISGIPVVESDVGKLVGILTNRDVRFASNAQQA------- 154
+T+ TL D + ++ ISG+PVV+++ G++VGI++ D+ +
Sbjct: 3 VITVKKDDTLRDVVEILLTGKISGVPVVDNE-GRVVGIVSEGDLIRKIYKGKGLFYVTLL 61
Query: 155 ------------------VGELMTRNLITVKKTVNLENAKALLHQHRIEKLLVVDDDGCC 196
V E+MT+ +ITV + +E+ ++ + I++L VV DDG
Sbjct: 62 YSVIFLDESKIKKLLGKKVEEIMTKKVITVDEDTTIEDVARIMSKKNIKRLPVV-DDGKL 120
Query: 197 IGLITVKDIERS 208
+G+I+ DI RS
Sbjct: 121 VGIISRGDIIRS 132