BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= gi|254780890|ref|YP_003065303.1| hypothetical protein CLIBASIA_03935 [Candidatus Liberibacter asiaticus str. psy62] (104 letters) Database: nr 14,124,377 sequences; 4,842,793,630 total letters Searching..................................................done Results from round 1 >gi|254780890|ref|YP_003065303.1| hypothetical protein CLIBASIA_03935 [Candidatus Liberibacter asiaticus str. psy62] gi|254040567|gb|ACT57363.1| hypothetical protein CLIBASIA_03935 [Candidatus Liberibacter asiaticus str. psy62] Length = 104 Score = 206 bits (525), Expect = 6e-52, Method: Compositional matrix adjust. Identities = 104/104 (100%), Positives = 104/104 (100%) Query: 1 MFYDSREKEVFLESEVVHNIRLQIEEISAILSKKSRDTPNQEIRTKIYIITARIIALIVF 60 MFYDSREKEVFLESEVVHNIRLQIEEISAILSKKSRDTPNQEIRTKIYIITARIIALIVF Sbjct: 1 MFYDSREKEVFLESEVVHNIRLQIEEISAILSKKSRDTPNQEIRTKIYIITARIIALIVF 60 Query: 61 REGEKSLIFDLLRTNQKTNSSLTQAIIQEIDTLQHQCKSIERDS 104 REGEKSLIFDLLRTNQKTNSSLTQAIIQEIDTLQHQCKSIERDS Sbjct: 61 REGEKSLIFDLLRTNQKTNSSLTQAIIQEIDTLQHQCKSIERDS 104 >gi|315122693|ref|YP_004063182.1| hypothetical protein CKC_04725 [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313496095|gb|ADR52694.1| hypothetical protein CKC_04725 [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 100 Score = 96.7 bits (239), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 47/91 (51%), Positives = 71/91 (78%) Query: 12 LESEVVHNIRLQIEEISAILSKKSRDTPNQEIRTKIYIITARIIALIVFREGEKSLIFDL 71 LES+V+++IRLQIEEI IL+++ ++ ++E+ TK+Y++TARIIAL REG+KS IF Sbjct: 10 LESKVIYSIRLQIEEIFKILTQEKKEISDKELYTKMYLVTARIIALTALREGKKSPIFHY 69 Query: 72 LRTNQKTNSSLTQAIIQEIDTLQHQCKSIER 102 L+ N+K +S LTQ +QEIDTL++Q I++ Sbjct: 70 LKKNKKYDSLLTQTTMQEIDTLKYQLTPIKK 100 >gi|222086837|ref|YP_002545371.1| hypothetical protein Arad_3509 [Agrobacterium radiobacter K84] gi|221724285|gb|ACM27441.1| conserved hypothetical protein [Agrobacterium radiobacter K84] Length = 388 Score = 40.0 bits (92), Expect = 0.11, Method: Compositional matrix adjust. Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 3/67 (4%) Query: 9 EVFLESEVVH---NIRLQIEEISAILSKKSRDTPNQEIRTKIYIITARIIALIVFREGEK 65 E +E ++ H +R + +S LSK +Q +R +I +I A ++AL +EG++ Sbjct: 297 ERTVEDDIAHLTEEVRNRAAALSDRLSKSRSPAHDQAMREEIAVIGANMVALTARQEGDQ 356 Query: 66 SLIFDLL 72 S IFDLL Sbjct: 357 SPIFDLL 363 >gi|261313118|ref|ZP_05952315.1| peptidoglycan-binding protein [Brucella pinnipedialis M163/99/10] gi|261302144|gb|EEY05641.1| peptidoglycan-binding protein [Brucella pinnipedialis M163/99/10] Length = 580 Score = 38.1 bits (87), Expect = 0.35, Method: Compositional matrix adjust. Identities = 27/97 (27%), Positives = 50/97 (51%), Gaps = 7/97 (7%) Query: 3 YDSREKEVFLESEVVHNIRLQIEEISAILSKKSRDTPNQEIRTKIYII-----TARIIAL 57 Y SR +SE +HN+ QI I+ L++ SR+ EIR ++ I + R I L Sbjct: 125 YASRYGASSADSEAIHNLEQQIASIAQHLAQPSREL--AEIRPRLDSIERSLHSNREIVL 182 Query: 58 IVFREGEKSLIFDLLRTNQKTNSSLTQAIIQEIDTLQ 94 RE +S++ +L+ K+ +++ Q + ++ L+ Sbjct: 183 DAAREATESVVARMLQHGPKSETAIAQQLAADMKALE 219 >gi|306841654|ref|ZP_07474343.1| Peptidoglycan-binding domain 1 protein [Brucella sp. BO2] gi|306288267|gb|EFM59647.1| Peptidoglycan-binding domain 1 protein [Brucella sp. BO2] Length = 946 Score = 37.4 bits (85), Expect = 0.68, Method: Composition-based stats. Identities = 27/97 (27%), Positives = 50/97 (51%), Gaps = 7/97 (7%) Query: 3 YDSREKEVFLESEVVHNIRLQIEEISAILSKKSRDTPNQEIRTKIYII-----TARIIAL 57 Y SR +SE +HN+ QI I+ L++ SR+ EIR ++ I + R I L Sbjct: 261 YASRYGPSSADSEAIHNLEQQIASIAQHLAQPSREL--SEIRPRLDSIERSLHSNREIVL 318 Query: 58 IVFREGEKSLIFDLLRTNQKTNSSLTQAIIQEIDTLQ 94 RE +S++ +L+ K+ +++ Q + ++ L+ Sbjct: 319 DAAREATESVVARMLQHGPKSETAIAQQLAADMKALE 355 >gi|256043697|ref|ZP_05446621.1| Peptidoglycan-binding domain 1 protein [Brucella melitensis bv. 1 str. Rev.1] Length = 949 Score = 37.4 bits (85), Expect = 0.76, Method: Composition-based stats. Identities = 27/97 (27%), Positives = 50/97 (51%), Gaps = 7/97 (7%) Query: 3 YDSREKEVFLESEVVHNIRLQIEEISAILSKKSRDTPNQEIRTKIYII-----TARIIAL 57 Y SR +SE +HN+ QI I+ L++ SR+ EIR ++ I + R I L Sbjct: 264 YASRYGASSADSEAIHNLEQQIASIAQHLAQPSREL--AEIRPRLDSIERSLHSNREIVL 321 Query: 58 IVFREGEKSLIFDLLRTNQKTNSSLTQAIIQEIDTLQ 94 RE +S++ +L+ K+ +++ Q + ++ L+ Sbjct: 322 DAAREATESVVARMLQHGPKSETAIAQQLAADMKALE 358 >gi|254712597|ref|ZP_05174408.1| Peptidoglycan-binding domain 1 protein [Brucella ceti M644/93/1] gi|254715669|ref|ZP_05177480.1| Peptidoglycan-binding domain 1 protein [Brucella ceti M13/05/1] Length = 949 Score = 37.4 bits (85), Expect = 0.77, Method: Composition-based stats. Identities = 27/97 (27%), Positives = 50/97 (51%), Gaps = 7/97 (7%) Query: 3 YDSREKEVFLESEVVHNIRLQIEEISAILSKKSRDTPNQEIRTKIYII-----TARIIAL 57 Y SR +SE +HN+ QI I+ L++ SR+ EIR ++ I + R I L Sbjct: 264 YASRYGASSADSEAIHNLEQQIASIAQHLAQPSREL--AEIRPRLDSIERSLHSNREIVL 321 Query: 58 IVFREGEKSLIFDLLRTNQKTNSSLTQAIIQEIDTLQ 94 RE +S++ +L+ K+ +++ Q + ++ L+ Sbjct: 322 DAAREATESVVARMLQHGPKSETAIAQQLAADMKALE 358 >gi|225686585|ref|YP_002734557.1| peptidoglycan-binding domain 1 protein [Brucella melitensis ATCC 23457] gi|225642690|gb|ACO02603.1| Peptidoglycan-binding domain 1 protein [Brucella melitensis ATCC 23457] Length = 949 Score = 37.4 bits (85), Expect = 0.77, Method: Composition-based stats. Identities = 27/97 (27%), Positives = 50/97 (51%), Gaps = 7/97 (7%) Query: 3 YDSREKEVFLESEVVHNIRLQIEEISAILSKKSRDTPNQEIRTKIYII-----TARIIAL 57 Y SR +SE +HN+ QI I+ L++ SR+ EIR ++ I + R I L Sbjct: 264 YASRYGASSADSEAIHNLEQQIASIAQHLAQPSREL--AEIRPRLDSIERSLHSNREIVL 321 Query: 58 IVFREGEKSLIFDLLRTNQKTNSSLTQAIIQEIDTLQ 94 RE +S++ +L+ K+ +++ Q + ++ L+ Sbjct: 322 DAAREATESVVARMLQHGPKSETAIAQQLAADMKALE 358 >gi|256111259|ref|ZP_05452290.1| Peptidoglycan-binding domain 1 protein [Brucella melitensis bv. 3 str. Ether] Length = 949 Score = 37.0 bits (84), Expect = 0.78, Method: Composition-based stats. Identities = 27/97 (27%), Positives = 50/97 (51%), Gaps = 7/97 (7%) Query: 3 YDSREKEVFLESEVVHNIRLQIEEISAILSKKSRDTPNQEIRTKIYII-----TARIIAL 57 Y SR +SE +HN+ QI I+ L++ SR+ EIR ++ I + R I L Sbjct: 264 YASRYGASSADSEAIHNLEQQIASIAQHLAQPSREL--AEIRPRLDSIERSLHSNREIVL 321 Query: 58 IVFREGEKSLIFDLLRTNQKTNSSLTQAIIQEIDTLQ 94 RE +S++ +L+ K+ +++ Q + ++ L+ Sbjct: 322 DAAREATESVVARMLQHGPKSETAIAQQLAADMKALE 358 >gi|254710930|ref|ZP_05172741.1| Peptidoglycan-binding domain 1 protein [Brucella pinnipedialis B2/94] gi|256029312|ref|ZP_05442926.1| Peptidoglycan-binding domain 1 protein [Brucella pinnipedialis M292/94/1] gi|256157508|ref|ZP_05455426.1| Peptidoglycan-binding domain 1 protein [Brucella ceti M490/95/1] gi|256253515|ref|ZP_05459051.1| Peptidoglycan-binding domain 1 protein [Brucella ceti B1/94] gi|260167596|ref|ZP_05754407.1| putative peptidoglycan-binding protein [Brucella sp. F5/99] Length = 949 Score = 37.0 bits (84), Expect = 0.83, Method: Composition-based stats. Identities = 27/97 (27%), Positives = 50/97 (51%), Gaps = 7/97 (7%) Query: 3 YDSREKEVFLESEVVHNIRLQIEEISAILSKKSRDTPNQEIRTKIYII-----TARIIAL 57 Y SR +SE +HN+ QI I+ L++ SR+ EIR ++ I + R I L Sbjct: 264 YASRYGASSADSEAIHNLEQQIASIAQHLAQPSREL--AEIRPRLDSIERSLHSNREIVL 321 Query: 58 IVFREGEKSLIFDLLRTNQKTNSSLTQAIIQEIDTLQ 94 RE +S++ +L+ K+ +++ Q + ++ L+ Sbjct: 322 DAAREATESVVARMLQHGPKSETAIAQQLAADMKALE 358 >gi|260564886|ref|ZP_05835371.1| peptidoglycan-binding domain 1 protein [Brucella melitensis bv. 1 str. 16M] gi|265990118|ref|ZP_06102675.1| peptidoglycan-binding domain 1 protein [Brucella melitensis bv. 1 str. Rev.1] gi|260152529|gb|EEW87622.1| peptidoglycan-binding domain 1 protein [Brucella melitensis bv. 1 str. 16M] gi|263000787|gb|EEZ13477.1| peptidoglycan-binding domain 1 protein [Brucella melitensis bv. 1 str. Rev.1] Length = 978 Score = 37.0 bits (84), Expect = 0.90, Method: Composition-based stats. Identities = 27/97 (27%), Positives = 50/97 (51%), Gaps = 7/97 (7%) Query: 3 YDSREKEVFLESEVVHNIRLQIEEISAILSKKSRDTPNQEIRTKIYII-----TARIIAL 57 Y SR +SE +HN+ QI I+ L++ SR+ EIR ++ I + R I L Sbjct: 293 YASRYGASSADSEAIHNLEQQIASIAQHLAQPSREL--AEIRPRLDSIERSLHSNREIVL 350 Query: 58 IVFREGEKSLIFDLLRTNQKTNSSLTQAIIQEIDTLQ 94 RE +S++ +L+ K+ +++ Q + ++ L+ Sbjct: 351 DAAREATESVVARMLQHGPKSETAIAQQLAADMKALE 387 >gi|265992772|ref|ZP_06105329.1| peptidoglycan binding domain-containing protein [Brucella melitensis bv. 3 str. Ether] gi|262763642|gb|EEZ09674.1| peptidoglycan binding domain-containing protein [Brucella melitensis bv. 3 str. Ether] Length = 978 Score = 37.0 bits (84), Expect = 0.92, Method: Composition-based stats. Identities = 27/97 (27%), Positives = 50/97 (51%), Gaps = 7/97 (7%) Query: 3 YDSREKEVFLESEVVHNIRLQIEEISAILSKKSRDTPNQEIRTKIYII-----TARIIAL 57 Y SR +SE +HN+ QI I+ L++ SR+ EIR ++ I + R I L Sbjct: 293 YASRYGASSADSEAIHNLEQQIASIAQHLAQPSREL--AEIRPRLDSIERSLHSNREIVL 350 Query: 58 IVFREGEKSLIFDLLRTNQKTNSSLTQAIIQEIDTLQ 94 RE +S++ +L+ K+ +++ Q + ++ L+ Sbjct: 351 DAAREATESVVARMLQHGPKSETAIAQQLAADMKALE 387 >gi|265999048|ref|ZP_06111541.1| peptidoglycan binding domain-containing protein [Brucella melitensis bv. 2 str. 63/9] gi|263092001|gb|EEZ16298.1| peptidoglycan binding domain-containing protein [Brucella melitensis bv. 2 str. 63/9] gi|326410976|gb|ADZ68040.1| peptidoglycan-binding domain 1 protein [Brucella melitensis M28] gi|326554267|gb|ADZ88906.1| peptidoglycan-binding domain 1 protein [Brucella melitensis M5-90] Length = 978 Score = 37.0 bits (84), Expect = 0.93, Method: Composition-based stats. Identities = 27/97 (27%), Positives = 50/97 (51%), Gaps = 7/97 (7%) Query: 3 YDSREKEVFLESEVVHNIRLQIEEISAILSKKSRDTPNQEIRTKIYII-----TARIIAL 57 Y SR +SE +HN+ QI I+ L++ SR+ EIR ++ I + R I L Sbjct: 293 YASRYGASSADSEAIHNLEQQIASIAQHLAQPSREL--AEIRPRLDSIERSLHSNREIVL 350 Query: 58 IVFREGEKSLIFDLLRTNQKTNSSLTQAIIQEIDTLQ 94 RE +S++ +L+ K+ +++ Q + ++ L+ Sbjct: 351 DAAREATESVVARMLQHGPKSETAIAQQLAADMKALE 387 >gi|261217417|ref|ZP_05931698.1| peptidoglycan-binding domain 1 protein [Brucella ceti M13/05/1] gi|261320291|ref|ZP_05959488.1| peptidoglycan-binding domain 1 protein [Brucella ceti M644/93/1] gi|260922506|gb|EEX89074.1| peptidoglycan-binding domain 1 protein [Brucella ceti M13/05/1] gi|261292981|gb|EEX96477.1| peptidoglycan-binding domain 1 protein [Brucella ceti M644/93/1] Length = 978 Score = 37.0 bits (84), Expect = 0.93, Method: Composition-based stats. Identities = 27/97 (27%), Positives = 50/97 (51%), Gaps = 7/97 (7%) Query: 3 YDSREKEVFLESEVVHNIRLQIEEISAILSKKSRDTPNQEIRTKIYII-----TARIIAL 57 Y SR +SE +HN+ QI I+ L++ SR+ EIR ++ I + R I L Sbjct: 293 YASRYGASSADSEAIHNLEQQIASIAQHLAQPSREL--AEIRPRLDSIERSLHSNREIVL 350 Query: 58 IVFREGEKSLIFDLLRTNQKTNSSLTQAIIQEIDTLQ 94 RE +S++ +L+ K+ +++ Q + ++ L+ Sbjct: 351 DAAREATESVVARMLQHGPKSETAIAQQLAADMKALE 387 >gi|256015586|ref|YP_003105595.1| putative peptidoglycan-binding protein [Brucella microti CCM 4915] gi|255998246|gb|ACU49933.1| putative peptidoglycan-binding protein [Brucella microti CCM 4915] Length = 978 Score = 37.0 bits (84), Expect = 0.98, Method: Composition-based stats. Identities = 27/97 (27%), Positives = 50/97 (51%), Gaps = 7/97 (7%) Query: 3 YDSREKEVFLESEVVHNIRLQIEEISAILSKKSRDTPNQEIRTKIYII-----TARIIAL 57 Y SR +SE +HN+ QI I+ L++ SR+ EIR ++ I + R I L Sbjct: 293 YASRYGASSADSEAIHNLEQQIASIAQHLAQPSREL--AEIRPRLDSIERSLHSNREIVL 350 Query: 58 IVFREGEKSLIFDLLRTNQKTNSSLTQAIIQEIDTLQ 94 RE +S++ +L+ K+ +++ Q + ++ L+ Sbjct: 351 DAAREATESVVARMLQHGPKSETAIAQQLAADMKALE 387 >gi|294853408|ref|ZP_06794080.1| peptidoglycan-binding protein [Brucella sp. NVSL 07-0026] gi|294819063|gb|EFG36063.1| peptidoglycan-binding protein [Brucella sp. NVSL 07-0026] Length = 978 Score = 37.0 bits (84), Expect = 0.99, Method: Composition-based stats. Identities = 27/97 (27%), Positives = 50/97 (51%), Gaps = 7/97 (7%) Query: 3 YDSREKEVFLESEVVHNIRLQIEEISAILSKKSRDTPNQEIRTKIYII-----TARIIAL 57 Y SR +SE +HN+ QI I+ L++ SR+ EIR ++ I + R I L Sbjct: 293 YASRYGASSADSEAIHNLEQQIASIAQHLAQPSREL--AEIRPRLDSIERSLHSNREIVL 350 Query: 58 IVFREGEKSLIFDLLRTNQKTNSSLTQAIIQEIDTLQ 94 RE +S++ +L+ K+ +++ Q + ++ L+ Sbjct: 351 DAAREATESVVARMLQHGPKSETAIAQQLAADMKALE 387 >gi|256059001|ref|ZP_05449212.1| Peptidoglycan-binding domain 1 protein [Brucella neotomae 5K33] Length = 930 Score = 37.0 bits (84), Expect = 0.99, Method: Composition-based stats. Identities = 27/97 (27%), Positives = 50/97 (51%), Gaps = 7/97 (7%) Query: 3 YDSREKEVFLESEVVHNIRLQIEEISAILSKKSRDTPNQEIRTKIYII-----TARIIAL 57 Y SR +SE +HN+ QI I+ L++ SR+ EIR ++ I + R I L Sbjct: 264 YASRYGASSADSEAIHNLEQQIASIAQHLAQPSREL--AEIRPRLDSIERSLHSNREIVL 321 Query: 58 IVFREGEKSLIFDLLRTNQKTNSSLTQAIIQEIDTLQ 94 RE +S++ +L+ K+ +++ Q + ++ L+ Sbjct: 322 DAAREATESVVARMLQHGPKSETAIAQQLAADMKALE 358 >gi|254695847|ref|ZP_05157675.1| peptidoglycan binding domain 1:Sel1-like repeat-containing protein [Brucella abortus bv. 3 str. Tulya] Length = 913 Score = 37.0 bits (84), Expect = 0.99, Method: Composition-based stats. Identities = 27/97 (27%), Positives = 50/97 (51%), Gaps = 7/97 (7%) Query: 3 YDSREKEVFLESEVVHNIRLQIEEISAILSKKSRDTPNQEIRTKIYII-----TARIIAL 57 Y SR +SE +HN+ QI I+ L++ SR+ EIR ++ I + R I L Sbjct: 264 YASRYGASSADSEAIHNLEQQIASIAQHLAQPSREL--AEIRPRLDSIERSLHSNREIVL 321 Query: 58 IVFREGEKSLIFDLLRTNQKTNSSLTQAIIQEIDTLQ 94 RE +S++ +L+ K+ +++ Q + ++ L+ Sbjct: 322 DAAREATESVVARMLQHGPKSETAIAQQLAADMKALE 358 >gi|225629289|ref|ZP_03787322.1| peptidoglycan-binding protein [Brucella ceti str. Cudo] gi|261220645|ref|ZP_05934926.1| peptidoglycan binding domain-containing protein [Brucella ceti B1/94] gi|261318512|ref|ZP_05957709.1| peptidoglycan-binding domain 1 protein [Brucella pinnipedialis B2/94] gi|261757018|ref|ZP_06000727.1| peptidoglycan-binding domain 1 protein [Brucella sp. F5/99] gi|265986312|ref|ZP_06098869.1| peptidoglycan-binding domain 1 protein [Brucella pinnipedialis M292/94/1] gi|265996006|ref|ZP_06108563.1| peptidoglycan-binding domain 1 protein [Brucella ceti M490/95/1] gi|225615785|gb|EEH12834.1| peptidoglycan-binding protein [Brucella ceti str. Cudo] gi|260919229|gb|EEX85882.1| peptidoglycan binding domain-containing protein [Brucella ceti B1/94] gi|261297735|gb|EEY01232.1| peptidoglycan-binding domain 1 protein [Brucella pinnipedialis B2/94] gi|261737002|gb|EEY24998.1| peptidoglycan-binding domain 1 protein [Brucella sp. F5/99] gi|262550303|gb|EEZ06464.1| peptidoglycan-binding domain 1 protein [Brucella ceti M490/95/1] gi|264658509|gb|EEZ28770.1| peptidoglycan-binding domain 1 protein [Brucella pinnipedialis M292/94/1] Length = 978 Score = 37.0 bits (84), Expect = 0.99, Method: Composition-based stats. Identities = 27/97 (27%), Positives = 50/97 (51%), Gaps = 7/97 (7%) Query: 3 YDSREKEVFLESEVVHNIRLQIEEISAILSKKSRDTPNQEIRTKIYII-----TARIIAL 57 Y SR +SE +HN+ QI I+ L++ SR+ EIR ++ I + R I L Sbjct: 293 YASRYGASSADSEAIHNLEQQIASIAQHLAQPSREL--AEIRPRLDSIERSLHSNREIVL 350 Query: 58 IVFREGEKSLIFDLLRTNQKTNSSLTQAIIQEIDTLQ 94 RE +S++ +L+ K+ +++ Q + ++ L+ Sbjct: 351 DAAREATESVVARMLQHGPKSETAIAQQLAADMKALE 387 >gi|254700036|ref|ZP_05161864.1| localization factor podJL [Brucella suis bv. 5 str. 513] Length = 913 Score = 37.0 bits (84), Expect = 1.0, Method: Composition-based stats. Identities = 27/97 (27%), Positives = 50/97 (51%), Gaps = 7/97 (7%) Query: 3 YDSREKEVFLESEVVHNIRLQIEEISAILSKKSRDTPNQEIRTKIYII-----TARIIAL 57 Y SR +SE +HN+ QI I+ L++ SR+ EIR ++ I + R I L Sbjct: 264 YASRYGASSADSEAIHNLEQQIASIAQHLAQPSREL--AEIRPRLDSIERSLHSNREIVL 321 Query: 58 IVFREGEKSLIFDLLRTNQKTNSSLTQAIIQEIDTLQ 94 RE +S++ +L+ K+ +++ Q + ++ L+ Sbjct: 322 DAAREATESVVARMLQHGPKSETAIAQQLAADMKALE 358 >gi|161620880|ref|YP_001594766.1| localization factor podJL [Brucella canis ATCC 23365] gi|254703156|ref|ZP_05164984.1| localization factor podJL [Brucella suis bv. 3 str. 686] gi|161337691|gb|ABX63995.1| Localization factor podJL [Brucella canis ATCC 23365] Length = 913 Score = 37.0 bits (84), Expect = 1.0, Method: Composition-based stats. Identities = 27/97 (27%), Positives = 50/97 (51%), Gaps = 7/97 (7%) Query: 3 YDSREKEVFLESEVVHNIRLQIEEISAILSKKSRDTPNQEIRTKIYII-----TARIIAL 57 Y SR +SE +HN+ QI I+ L++ SR+ EIR ++ I + R I L Sbjct: 264 YASRYGASSADSEAIHNLEQQIASIAQHLAQPSREL--AEIRPRLDSIERSLHSNREIVL 321 Query: 58 IVFREGEKSLIFDLLRTNQKTNSSLTQAIIQEIDTLQ 94 RE +S++ +L+ K+ +++ Q + ++ L+ Sbjct: 322 DAAREATESVVARMLQHGPKSETAIAQQLAADMKALE 358 >gi|62317347|ref|YP_223200.1| peptidoglycan-binding protein [Brucella abortus bv. 1 str. 9-941] gi|83269325|ref|YP_418616.1| Sel1-like repeat-containing protein [Brucella melitensis biovar Abortus 2308] gi|254698625|ref|ZP_05160453.1| Sel1-like repeat [Brucella abortus bv. 2 str. 86/8/59] gi|254732072|ref|ZP_05190650.1| Sel1-like repeat [Brucella abortus bv. 4 str. 292] gi|256256027|ref|ZP_05461563.1| Sel1-like repeat [Brucella abortus bv. 9 str. C68] gi|62197540|gb|AAX75839.1| peptidoglycan-binding protein [Brucella abortus bv. 1 str. 9-941] gi|82939599|emb|CAJ12579.1| Putative peptidoglycan binding domain 1:Sel1-like repeat [Brucella melitensis biovar Abortus 2308] Length = 913 Score = 37.0 bits (84), Expect = 1.0, Method: Composition-based stats. Identities = 27/97 (27%), Positives = 50/97 (51%), Gaps = 7/97 (7%) Query: 3 YDSREKEVFLESEVVHNIRLQIEEISAILSKKSRDTPNQEIRTKIYII-----TARIIAL 57 Y SR +SE +HN+ QI I+ L++ SR+ EIR ++ I + R I L Sbjct: 264 YASRYGASSADSEAIHNLEQQIASIAQHLAQPSREL--AEIRPRLDSIERSLHSNREIVL 321 Query: 58 IVFREGEKSLIFDLLRTNQKTNSSLTQAIIQEIDTLQ 94 RE +S++ +L+ K+ +++ Q + ++ L+ Sbjct: 322 DAAREATESVVARMLQHGPKSETAIAQQLAADMKALE 358 >gi|23500552|ref|NP_699992.1| peptidoglycan-binding protein [Brucella suis 1330] gi|23464187|gb|AAN33997.1| peptidoglycan-binding protein, putative [Brucella suis 1330] Length = 913 Score = 36.6 bits (83), Expect = 1.0, Method: Composition-based stats. Identities = 27/97 (27%), Positives = 50/97 (51%), Gaps = 7/97 (7%) Query: 3 YDSREKEVFLESEVVHNIRLQIEEISAILSKKSRDTPNQEIRTKIYII-----TARIIAL 57 Y SR +SE +HN+ QI I+ L++ SR+ EIR ++ I + R I L Sbjct: 264 YASRYGASSADSEAIHNLEQQIASIAQHLAQPSREL--AEIRPRLDSIERSLHSNREIVL 321 Query: 58 IVFREGEKSLIFDLLRTNQKTNSSLTQAIIQEIDTLQ 94 RE +S++ +L+ K+ +++ Q + ++ L+ Sbjct: 322 DAAREATESVVARMLQHGPKSETAIAQQLAADMKALE 358 >gi|260567915|ref|ZP_05838384.1| peptidoglycan-binding domain 1 protein [Brucella suis bv. 4 str. 40] gi|261753776|ref|ZP_05997485.1| peptidoglycan-binding domain 1 protein [Brucella suis bv. 3 str. 686] gi|260154580|gb|EEW89661.1| peptidoglycan-binding domain 1 protein [Brucella suis bv. 4 str. 40] gi|261743529|gb|EEY31455.1| peptidoglycan-binding domain 1 protein [Brucella suis bv. 3 str. 686] Length = 942 Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats. Identities = 27/97 (27%), Positives = 50/97 (51%), Gaps = 7/97 (7%) Query: 3 YDSREKEVFLESEVVHNIRLQIEEISAILSKKSRDTPNQEIRTKIYII-----TARIIAL 57 Y SR +SE +HN+ QI I+ L++ SR+ EIR ++ I + R I L Sbjct: 293 YASRYGASSADSEAIHNLEQQIASIAQHLAQPSREL--AEIRPRLDSIERSLHSNREIVL 350 Query: 58 IVFREGEKSLIFDLLRTNQKTNSSLTQAIIQEIDTLQ 94 RE +S++ +L+ K+ +++ Q + ++ L+ Sbjct: 351 DAAREATESVVARMLQHGPKSETAIAQQLAADMKALE 387 >gi|261322945|ref|ZP_05962142.1| peptidoglycan binding domain-containing protein [Brucella neotomae 5K33] gi|261298925|gb|EEY02422.1| peptidoglycan binding domain-containing protein [Brucella neotomae 5K33] Length = 959 Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats. Identities = 27/97 (27%), Positives = 50/97 (51%), Gaps = 7/97 (7%) Query: 3 YDSREKEVFLESEVVHNIRLQIEEISAILSKKSRDTPNQEIRTKIYII-----TARIIAL 57 Y SR +SE +HN+ QI I+ L++ SR+ EIR ++ I + R I L Sbjct: 293 YASRYGASSADSEAIHNLEQQIASIAQHLAQPSREL--AEIRPRLDSIERSLHSNREIVL 350 Query: 58 IVFREGEKSLIFDLLRTNQKTNSSLTQAIIQEIDTLQ 94 RE +S++ +L+ K+ +++ Q + ++ L+ Sbjct: 351 DAAREATESVVARMLQHGPKSETAIAQQLAADMKALE 387 >gi|261750518|ref|ZP_05994227.1| peptidoglycan-binding domain 1 protein [Brucella suis bv. 5 str. 513] gi|261740271|gb|EEY28197.1| peptidoglycan-binding domain 1 protein [Brucella suis bv. 5 str. 513] Length = 942 Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats. Identities = 27/97 (27%), Positives = 50/97 (51%), Gaps = 7/97 (7%) Query: 3 YDSREKEVFLESEVVHNIRLQIEEISAILSKKSRDTPNQEIRTKIYII-----TARIIAL 57 Y SR +SE +HN+ QI I+ L++ SR+ EIR ++ I + R I L Sbjct: 293 YASRYGASSADSEAIHNLEQQIASIAQHLAQPSREL--AEIRPRLDSIERSLHSNREIVL 350 Query: 58 IVFREGEKSLIFDLLRTNQKTNSSLTQAIIQEIDTLQ 94 RE +S++ +L+ K+ +++ Q + ++ L+ Sbjct: 351 DAAREATESVVARMLQHGPKSETAIAQQLAADMKALE 387 >gi|261216267|ref|ZP_05930548.1| peptidoglycan-binding domain 1 protein [Brucella abortus bv. 3 str. Tulya] gi|260917874|gb|EEX84735.1| peptidoglycan-binding domain 1 protein [Brucella abortus bv. 3 str. Tulya] Length = 942 Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats. Identities = 27/97 (27%), Positives = 50/97 (51%), Gaps = 7/97 (7%) Query: 3 YDSREKEVFLESEVVHNIRLQIEEISAILSKKSRDTPNQEIRTKIYII-----TARIIAL 57 Y SR +SE +HN+ QI I+ L++ SR+ EIR ++ I + R I L Sbjct: 293 YASRYGASSADSEAIHNLEQQIASIAQHLAQPSREL--AEIRPRLDSIERSLHSNREIVL 350 Query: 58 IVFREGEKSLIFDLLRTNQKTNSSLTQAIIQEIDTLQ 94 RE +S++ +L+ K+ +++ Q + ++ L+ Sbjct: 351 DAAREATESVVARMLQHGPKSETAIAQQLAADMKALE 387 >gi|254690844|ref|ZP_05154098.1| Sel1-like repeat [Brucella abortus bv. 6 str. 870] Length = 864 Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats. Identities = 27/97 (27%), Positives = 50/97 (51%), Gaps = 7/97 (7%) Query: 3 YDSREKEVFLESEVVHNIRLQIEEISAILSKKSRDTPNQEIRTKIYII-----TARIIAL 57 Y SR +SE +HN+ QI I+ L++ SR+ EIR ++ I + R I L Sbjct: 264 YASRYGASSADSEAIHNLEQQIASIAQHLAQPSREL--AEIRPRLDSIERSLHSNREIVL 321 Query: 58 IVFREGEKSLIFDLLRTNQKTNSSLTQAIIQEIDTLQ 94 RE +S++ +L+ K+ +++ Q + ++ L+ Sbjct: 322 DAAREATESVVARMLQHGPKSETAIAQQLAADMKALE 358 >gi|189022598|ref|YP_001932339.1| Sel1-like repeat [Brucella abortus S19] gi|237816900|ref|ZP_04595892.1| Localization factor podJL [Brucella abortus str. 2308 A] gi|260544579|ref|ZP_05820400.1| peptidoglycan-binding domain 1 protein [Brucella abortus NCTC 8038] gi|260759855|ref|ZP_05872203.1| peptidoglycan-binding domain 1 protein [Brucella abortus bv. 4 str. 292] gi|260763094|ref|ZP_05875426.1| peptidoglycan-binding domain 1 protein [Brucella abortus bv. 2 str. 86/8/59] gi|260882246|ref|ZP_05893860.1| peptidoglycan binding domain-containing protein [Brucella abortus bv. 9 str. C68] gi|297249385|ref|ZP_06933086.1| TPR repeat-containing protein [Brucella abortus bv. 5 str. B3196] gi|189021172|gb|ACD73893.1| Sel1-like repeat [Brucella abortus S19] gi|237787713|gb|EEP61929.1| Localization factor podJL [Brucella abortus str. 2308 A] gi|260097850|gb|EEW81724.1| peptidoglycan-binding domain 1 protein [Brucella abortus NCTC 8038] gi|260670173|gb|EEX57113.1| peptidoglycan-binding domain 1 protein [Brucella abortus bv. 4 str. 292] gi|260673515|gb|EEX60336.1| peptidoglycan-binding domain 1 protein [Brucella abortus bv. 2 str. 86/8/59] gi|260871774|gb|EEX78843.1| peptidoglycan binding domain-containing protein [Brucella abortus bv. 9 str. C68] gi|297173254|gb|EFH32618.1| TPR repeat-containing protein [Brucella abortus bv. 5 str. B3196] Length = 942 Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats. Identities = 27/97 (27%), Positives = 50/97 (51%), Gaps = 7/97 (7%) Query: 3 YDSREKEVFLESEVVHNIRLQIEEISAILSKKSRDTPNQEIRTKIYII-----TARIIAL 57 Y SR +SE +HN+ QI I+ L++ SR+ EIR ++ I + R I L Sbjct: 293 YASRYGASSADSEAIHNLEQQIASIAQHLAQPSREL--AEIRPRLDSIERSLHSNREIVL 350 Query: 58 IVFREGEKSLIFDLLRTNQKTNSSLTQAIIQEIDTLQ 94 RE +S++ +L+ K+ +++ Q + ++ L+ Sbjct: 351 DAAREATESVVARMLQHGPKSETAIAQQLAADMKALE 387 >gi|163844942|ref|YP_001622597.1| hypothetical protein BSUIS_B0814 [Brucella suis ATCC 23445] gi|163675665|gb|ABY39775.1| Hypothetical protein, conserved [Brucella suis ATCC 23445] Length = 913 Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats. Identities = 27/97 (27%), Positives = 50/97 (51%), Gaps = 7/97 (7%) Query: 3 YDSREKEVFLESEVVHNIRLQIEEISAILSKKSRDTPNQEIRTKIYII-----TARIIAL 57 Y SR +SE +HN+ QI I+ L++ SR+ EIR ++ I + R I L Sbjct: 264 YASRYGASSADSEAIHNLEQQIASIAQHLAQPSREL--AEIRPRLDSIERSLHSNREIVL 321 Query: 58 IVFREGEKSLIFDLLRTNQKTNSSLTQAIIQEIDTLQ 94 RE +S++ +L+ K+ +++ Q + ++ L+ Sbjct: 322 DAAREATESVVARMLQHGPKSETAIAQQLAADMKALE 358 >gi|260756423|ref|ZP_05868771.1| peptidoglycan-binding domain 1 protein [Brucella abortus bv. 6 str. 870] gi|260676531|gb|EEX63352.1| peptidoglycan-binding domain 1 protein [Brucella abortus bv. 6 str. 870] Length = 893 Score = 36.6 bits (83), Expect = 1.2, Method: Composition-based stats. Identities = 27/97 (27%), Positives = 50/97 (51%), Gaps = 7/97 (7%) Query: 3 YDSREKEVFLESEVVHNIRLQIEEISAILSKKSRDTPNQEIRTKIYII-----TARIIAL 57 Y SR +SE +HN+ QI I+ L++ SR+ EIR ++ I + R I L Sbjct: 293 YASRYGASSADSEAIHNLEQQIASIAQHLAQPSREL--AEIRPRLDSIERSLHSNREIVL 350 Query: 58 IVFREGEKSLIFDLLRTNQKTNSSLTQAIIQEIDTLQ 94 RE +S++ +L+ K+ +++ Q + ++ L+ Sbjct: 351 DAAREATESVVARMLQHGPKSETAIAQQLAADMKALE 387 >gi|254720079|ref|ZP_05181890.1| putative peptidoglycan-binding protein [Brucella sp. 83/13] Length = 950 Score = 36.6 bits (83), Expect = 1.2, Method: Composition-based stats. Identities = 27/97 (27%), Positives = 49/97 (50%), Gaps = 7/97 (7%) Query: 3 YDSREKEVFLESEVVHNIRLQIEEISAILSKKSRDTPNQEIRTKIYII-----TARIIAL 57 Y SR +SE +HN+ QI I+ L++ SR+ EIR ++ I + R I L Sbjct: 264 YASRYGASSADSEAIHNLEQQIASIAQHLAQPSREL--SEIRPRLDSIERSLHSNREIVL 321 Query: 58 IVFREGEKSLIFDLLRTNQKTNSSLTQAIIQEIDTLQ 94 RE +S++ +L+ K +++ Q + ++ L+ Sbjct: 322 DAAREATESVVARMLQHGPKGETAIAQQLAADMKALE 358 >gi|148558507|ref|YP_001257764.1| putative peptidoglycan-binding protein [Brucella ovis ATCC 25840] gi|148369792|gb|ABQ62664.1| putative peptidoglycan-binding protein [Brucella ovis ATCC 25840] Length = 978 Score = 36.6 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 27/97 (27%), Positives = 50/97 (51%), Gaps = 7/97 (7%) Query: 3 YDSREKEVFLESEVVHNIRLQIEEISAILSKKSRDTPNQEIRTKIYII-----TARIIAL 57 Y SR +SE +HN+ QI I+ L++ SR+ EIR ++ I + R I L Sbjct: 293 YASRYGASPADSEAIHNLEQQIASIAQHLAQPSREL--AEIRPRLDSIERSLHSNREIVL 350 Query: 58 IVFREGEKSLIFDLLRTNQKTNSSLTQAIIQEIDTLQ 94 RE +S++ +L+ K+ +++ Q + ++ L+ Sbjct: 351 DAAREATESVVARMLQHGPKSETAIAQQLAADMKALE 387 >gi|306837317|ref|ZP_07470199.1| Peptidoglycan-binding domain 1 protein [Brucella sp. NF 2653] gi|306407594|gb|EFM63791.1| Peptidoglycan-binding domain 1 protein [Brucella sp. NF 2653] Length = 979 Score = 36.2 bits (82), Expect = 1.3, Method: Composition-based stats. Identities = 27/97 (27%), Positives = 49/97 (50%), Gaps = 7/97 (7%) Query: 3 YDSREKEVFLESEVVHNIRLQIEEISAILSKKSRDTPNQEIRTKIYII-----TARIIAL 57 Y SR +SE +HN+ QI I+ L++ SR+ EIR ++ I + R I L Sbjct: 293 YASRYGASSADSEAIHNLEQQIASIAQHLAQPSREL--SEIRPRLDSIERSLHSNREIVL 350 Query: 58 IVFREGEKSLIFDLLRTNQKTNSSLTQAIIQEIDTLQ 94 RE +S++ +L+ K +++ Q + ++ L+ Sbjct: 351 DAAREATESVVARMLQHGPKGETAIAQQLAADMKALE 387 >gi|265985084|ref|ZP_06097819.1| peptidoglycan-binding domain 1 protein [Brucella sp. 83/13] gi|264663676|gb|EEZ33937.1| peptidoglycan-binding domain 1 protein [Brucella sp. 83/13] Length = 979 Score = 36.2 bits (82), Expect = 1.3, Method: Composition-based stats. Identities = 27/97 (27%), Positives = 49/97 (50%), Gaps = 7/97 (7%) Query: 3 YDSREKEVFLESEVVHNIRLQIEEISAILSKKSRDTPNQEIRTKIYII-----TARIIAL 57 Y SR +SE +HN+ QI I+ L++ SR+ EIR ++ I + R I L Sbjct: 293 YASRYGASSADSEAIHNLEQQIASIAQHLAQPSREL--SEIRPRLDSIERSLHSNREIVL 350 Query: 58 IVFREGEKSLIFDLLRTNQKTNSSLTQAIIQEIDTLQ 94 RE +S++ +L+ K +++ Q + ++ L+ Sbjct: 351 DAAREATESVVARMLQHGPKGETAIAQQLAADMKALE 387 >gi|149186824|ref|ZP_01865134.1| putative signal transduction histidine kinase with GAF domain [Erythrobacter sp. SD-21] gi|148829491|gb|EDL47932.1| putative signal transduction histidine kinase with GAF domain [Erythrobacter sp. SD-21] Length = 208 Score = 35.4 bits (80), Expect = 2.4, Method: Compositional matrix adjust. Identities = 26/90 (28%), Positives = 46/90 (51%), Gaps = 6/90 (6%) Query: 7 EKEVFLESEVVHNIRLQIEEISAILSKKSRDTPNQEIRTKIYIITARIIALIVFRE---- 62 E+E L EV H ++ + IS+I++ K+R +P++ RT + I RI +L E Sbjct: 11 EREQTLRREVDHRVKNSLASISSIITMKARRSPDEGTRTALEDIGLRIRSLASLHEQLQD 70 Query: 63 -GEKSLIFDLLRTNQKTNSSLTQAIIQEID 91 G + DL+ ++ + L Q + Q +D Sbjct: 71 VGAHQTV-DLVVLFERVGTDLRQLLPQGVD 99 Searching..................................................done Results from round 2 CONVERGED! >gi|254780890|ref|YP_003065303.1| hypothetical protein CLIBASIA_03935 [Candidatus Liberibacter asiaticus str. psy62] gi|254040567|gb|ACT57363.1| hypothetical protein CLIBASIA_03935 [Candidatus Liberibacter asiaticus str. psy62] Length = 104 Score = 142 bits (358), Expect = 1e-32, Method: Composition-based stats. Identities = 104/104 (100%), Positives = 104/104 (100%) Query: 1 MFYDSREKEVFLESEVVHNIRLQIEEISAILSKKSRDTPNQEIRTKIYIITARIIALIVF 60 MFYDSREKEVFLESEVVHNIRLQIEEISAILSKKSRDTPNQEIRTKIYIITARIIALIVF Sbjct: 1 MFYDSREKEVFLESEVVHNIRLQIEEISAILSKKSRDTPNQEIRTKIYIITARIIALIVF 60 Query: 61 REGEKSLIFDLLRTNQKTNSSLTQAIIQEIDTLQHQCKSIERDS 104 REGEKSLIFDLLRTNQKTNSSLTQAIIQEIDTLQHQCKSIERDS Sbjct: 61 REGEKSLIFDLLRTNQKTNSSLTQAIIQEIDTLQHQCKSIERDS 104 >gi|315122693|ref|YP_004063182.1| hypothetical protein CKC_04725 [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313496095|gb|ADR52694.1| hypothetical protein CKC_04725 [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 100 Score = 118 bits (297), Expect = 2e-25, Method: Composition-based stats. Identities = 49/98 (50%), Positives = 73/98 (74%) Query: 5 SREKEVFLESEVVHNIRLQIEEISAILSKKSRDTPNQEIRTKIYIITARIIALIVFREGE 64 S K LES+V+++IRLQIEEI IL+++ ++ ++E+ TK+Y++TARIIAL REG+ Sbjct: 3 STRKNDCLESKVIYSIRLQIEEIFKILTQEKKEISDKELYTKMYLVTARIIALTALREGK 62 Query: 65 KSLIFDLLRTNQKTNSSLTQAIIQEIDTLQHQCKSIER 102 KS IF L+ N+K +S LTQ +QEIDTL++Q I++ Sbjct: 63 KSPIFHYLKKNKKYDSLLTQTTMQEIDTLKYQLTPIKK 100 >gi|222086837|ref|YP_002545371.1| hypothetical protein Arad_3509 [Agrobacterium radiobacter K84] gi|221724285|gb|ACM27441.1| conserved hypothetical protein [Agrobacterium radiobacter K84] Length = 388 Score = 38.4 bits (88), Expect = 0.30, Method: Composition-based stats. Identities = 20/55 (36%), Positives = 32/55 (58%) Query: 20 IRLQIEEISAILSKKSRDTPNQEIRTKIYIITARIIALIVFREGEKSLIFDLLRT 74 +R + +S LSK +Q +R +I +I A ++AL +EG++S IFDLL Sbjct: 311 VRNRAAALSDRLSKSRSPAHDQAMREEIAVIGANMVALTARQEGDQSPIFDLLPK 365 >gi|306841654|ref|ZP_07474343.1| Peptidoglycan-binding domain 1 protein [Brucella sp. BO2] gi|306288267|gb|EFM59647.1| Peptidoglycan-binding domain 1 protein [Brucella sp. BO2] Length = 946 Score = 38.4 bits (88), Expect = 0.30, Method: Composition-based stats. Identities = 26/97 (26%), Positives = 50/97 (51%), Gaps = 7/97 (7%) Query: 3 YDSREKEVFLESEVVHNIRLQIEEISAILSKKSRDTPNQEIRTKI-----YIITARIIAL 57 Y SR +SE +HN+ QI I+ L++ SR+ EIR ++ + + R I L Sbjct: 261 YASRYGPSSADSEAIHNLEQQIASIAQHLAQPSRELS--EIRPRLDSIERSLHSNREIVL 318 Query: 58 IVFREGEKSLIFDLLRTNQKTNSSLTQAIIQEIDTLQ 94 RE +S++ +L+ K+ +++ Q + ++ L+ Sbjct: 319 DAAREATESVVARMLQHGPKSETAIAQQLAADMKALE 355 >gi|254720079|ref|ZP_05181890.1| putative peptidoglycan-binding protein [Brucella sp. 83/13] Length = 950 Score = 38.1 bits (87), Expect = 0.47, Method: Composition-based stats. Identities = 26/97 (26%), Positives = 49/97 (50%), Gaps = 7/97 (7%) Query: 3 YDSREKEVFLESEVVHNIRLQIEEISAILSKKSRDTPNQEIRTKI-----YIITARIIAL 57 Y SR +SE +HN+ QI I+ L++ SR+ EIR ++ + + R I L Sbjct: 264 YASRYGASSADSEAIHNLEQQIASIAQHLAQPSRELS--EIRPRLDSIERSLHSNREIVL 321 Query: 58 IVFREGEKSLIFDLLRTNQKTNSSLTQAIIQEIDTLQ 94 RE +S++ +L+ K +++ Q + ++ L+ Sbjct: 322 DAAREATESVVARMLQHGPKGETAIAQQLAADMKALE 358 >gi|265985084|ref|ZP_06097819.1| peptidoglycan-binding domain 1 protein [Brucella sp. 83/13] gi|264663676|gb|EEZ33937.1| peptidoglycan-binding domain 1 protein [Brucella sp. 83/13] Length = 979 Score = 38.1 bits (87), Expect = 0.47, Method: Composition-based stats. Identities = 26/97 (26%), Positives = 49/97 (50%), Gaps = 7/97 (7%) Query: 3 YDSREKEVFLESEVVHNIRLQIEEISAILSKKSRDTPNQEIRTKI-----YIITARIIAL 57 Y SR +SE +HN+ QI I+ L++ SR+ EIR ++ + + R I L Sbjct: 293 YASRYGASSADSEAIHNLEQQIASIAQHLAQPSRELS--EIRPRLDSIERSLHSNREIVL 350 Query: 58 IVFREGEKSLIFDLLRTNQKTNSSLTQAIIQEIDTLQ 94 RE +S++ +L+ K +++ Q + ++ L+ Sbjct: 351 DAAREATESVVARMLQHGPKGETAIAQQLAADMKALE 387 >gi|306837317|ref|ZP_07470199.1| Peptidoglycan-binding domain 1 protein [Brucella sp. NF 2653] gi|306407594|gb|EFM63791.1| Peptidoglycan-binding domain 1 protein [Brucella sp. NF 2653] Length = 979 Score = 37.7 bits (86), Expect = 0.48, Method: Composition-based stats. Identities = 26/97 (26%), Positives = 49/97 (50%), Gaps = 7/97 (7%) Query: 3 YDSREKEVFLESEVVHNIRLQIEEISAILSKKSRDTPNQEIRTKI-----YIITARIIAL 57 Y SR +SE +HN+ QI I+ L++ SR+ EIR ++ + + R I L Sbjct: 293 YASRYGASSADSEAIHNLEQQIASIAQHLAQPSRELS--EIRPRLDSIERSLHSNREIVL 350 Query: 58 IVFREGEKSLIFDLLRTNQKTNSSLTQAIIQEIDTLQ 94 RE +S++ +L+ K +++ Q + ++ L+ Sbjct: 351 DAAREATESVVARMLQHGPKGETAIAQQLAADMKALE 387 >gi|256043697|ref|ZP_05446621.1| Peptidoglycan-binding domain 1 protein [Brucella melitensis bv. 1 str. Rev.1] Length = 949 Score = 37.7 bits (86), Expect = 0.51, Method: Composition-based stats. Identities = 26/97 (26%), Positives = 50/97 (51%), Gaps = 7/97 (7%) Query: 3 YDSREKEVFLESEVVHNIRLQIEEISAILSKKSRDTPNQEIRTKI-----YIITARIIAL 57 Y SR +SE +HN+ QI I+ L++ SR+ EIR ++ + + R I L Sbjct: 264 YASRYGASSADSEAIHNLEQQIASIAQHLAQPSRELA--EIRPRLDSIERSLHSNREIVL 321 Query: 58 IVFREGEKSLIFDLLRTNQKTNSSLTQAIIQEIDTLQ 94 RE +S++ +L+ K+ +++ Q + ++ L+ Sbjct: 322 DAAREATESVVARMLQHGPKSETAIAQQLAADMKALE 358 >gi|254712597|ref|ZP_05174408.1| Peptidoglycan-binding domain 1 protein [Brucella ceti M644/93/1] gi|254715669|ref|ZP_05177480.1| Peptidoglycan-binding domain 1 protein [Brucella ceti M13/05/1] Length = 949 Score = 37.7 bits (86), Expect = 0.53, Method: Composition-based stats. Identities = 26/97 (26%), Positives = 50/97 (51%), Gaps = 7/97 (7%) Query: 3 YDSREKEVFLESEVVHNIRLQIEEISAILSKKSRDTPNQEIRTKI-----YIITARIIAL 57 Y SR +SE +HN+ QI I+ L++ SR+ EIR ++ + + R I L Sbjct: 264 YASRYGASSADSEAIHNLEQQIASIAQHLAQPSRELA--EIRPRLDSIERSLHSNREIVL 321 Query: 58 IVFREGEKSLIFDLLRTNQKTNSSLTQAIIQEIDTLQ 94 RE +S++ +L+ K+ +++ Q + ++ L+ Sbjct: 322 DAAREATESVVARMLQHGPKSETAIAQQLAADMKALE 358 >gi|260564886|ref|ZP_05835371.1| peptidoglycan-binding domain 1 protein [Brucella melitensis bv. 1 str. 16M] gi|265990118|ref|ZP_06102675.1| peptidoglycan-binding domain 1 protein [Brucella melitensis bv. 1 str. Rev.1] gi|260152529|gb|EEW87622.1| peptidoglycan-binding domain 1 protein [Brucella melitensis bv. 1 str. 16M] gi|263000787|gb|EEZ13477.1| peptidoglycan-binding domain 1 protein [Brucella melitensis bv. 1 str. Rev.1] Length = 978 Score = 37.7 bits (86), Expect = 0.54, Method: Composition-based stats. Identities = 26/97 (26%), Positives = 50/97 (51%), Gaps = 7/97 (7%) Query: 3 YDSREKEVFLESEVVHNIRLQIEEISAILSKKSRDTPNQEIRTKI-----YIITARIIAL 57 Y SR +SE +HN+ QI I+ L++ SR+ EIR ++ + + R I L Sbjct: 293 YASRYGASSADSEAIHNLEQQIASIAQHLAQPSRELA--EIRPRLDSIERSLHSNREIVL 350 Query: 58 IVFREGEKSLIFDLLRTNQKTNSSLTQAIIQEIDTLQ 94 RE +S++ +L+ K+ +++ Q + ++ L+ Sbjct: 351 DAAREATESVVARMLQHGPKSETAIAQQLAADMKALE 387 >gi|265999048|ref|ZP_06111541.1| peptidoglycan binding domain-containing protein [Brucella melitensis bv. 2 str. 63/9] gi|263092001|gb|EEZ16298.1| peptidoglycan binding domain-containing protein [Brucella melitensis bv. 2 str. 63/9] gi|326410976|gb|ADZ68040.1| peptidoglycan-binding domain 1 protein [Brucella melitensis M28] gi|326554267|gb|ADZ88906.1| peptidoglycan-binding domain 1 protein [Brucella melitensis M5-90] Length = 978 Score = 37.7 bits (86), Expect = 0.56, Method: Composition-based stats. Identities = 26/97 (26%), Positives = 50/97 (51%), Gaps = 7/97 (7%) Query: 3 YDSREKEVFLESEVVHNIRLQIEEISAILSKKSRDTPNQEIRTKI-----YIITARIIAL 57 Y SR +SE +HN+ QI I+ L++ SR+ EIR ++ + + R I L Sbjct: 293 YASRYGASSADSEAIHNLEQQIASIAQHLAQPSRELA--EIRPRLDSIERSLHSNREIVL 350 Query: 58 IVFREGEKSLIFDLLRTNQKTNSSLTQAIIQEIDTLQ 94 RE +S++ +L+ K+ +++ Q + ++ L+ Sbjct: 351 DAAREATESVVARMLQHGPKSETAIAQQLAADMKALE 387 >gi|265992772|ref|ZP_06105329.1| peptidoglycan binding domain-containing protein [Brucella melitensis bv. 3 str. Ether] gi|262763642|gb|EEZ09674.1| peptidoglycan binding domain-containing protein [Brucella melitensis bv. 3 str. Ether] Length = 978 Score = 37.7 bits (86), Expect = 0.56, Method: Composition-based stats. Identities = 26/97 (26%), Positives = 50/97 (51%), Gaps = 7/97 (7%) Query: 3 YDSREKEVFLESEVVHNIRLQIEEISAILSKKSRDTPNQEIRTKI-----YIITARIIAL 57 Y SR +SE +HN+ QI I+ L++ SR+ EIR ++ + + R I L Sbjct: 293 YASRYGASSADSEAIHNLEQQIASIAQHLAQPSRELA--EIRPRLDSIERSLHSNREIVL 350 Query: 58 IVFREGEKSLIFDLLRTNQKTNSSLTQAIIQEIDTLQ 94 RE +S++ +L+ K+ +++ Q + ++ L+ Sbjct: 351 DAAREATESVVARMLQHGPKSETAIAQQLAADMKALE 387 >gi|261217417|ref|ZP_05931698.1| peptidoglycan-binding domain 1 protein [Brucella ceti M13/05/1] gi|261320291|ref|ZP_05959488.1| peptidoglycan-binding domain 1 protein [Brucella ceti M644/93/1] gi|260922506|gb|EEX89074.1| peptidoglycan-binding domain 1 protein [Brucella ceti M13/05/1] gi|261292981|gb|EEX96477.1| peptidoglycan-binding domain 1 protein [Brucella ceti M644/93/1] Length = 978 Score = 37.7 bits (86), Expect = 0.56, Method: Composition-based stats. Identities = 26/97 (26%), Positives = 50/97 (51%), Gaps = 7/97 (7%) Query: 3 YDSREKEVFLESEVVHNIRLQIEEISAILSKKSRDTPNQEIRTKI-----YIITARIIAL 57 Y SR +SE +HN+ QI I+ L++ SR+ EIR ++ + + R I L Sbjct: 293 YASRYGASSADSEAIHNLEQQIASIAQHLAQPSRELA--EIRPRLDSIERSLHSNREIVL 350 Query: 58 IVFREGEKSLIFDLLRTNQKTNSSLTQAIIQEIDTLQ 94 RE +S++ +L+ K+ +++ Q + ++ L+ Sbjct: 351 DAAREATESVVARMLQHGPKSETAIAQQLAADMKALE 387 >gi|256111259|ref|ZP_05452290.1| Peptidoglycan-binding domain 1 protein [Brucella melitensis bv. 3 str. Ether] Length = 949 Score = 37.7 bits (86), Expect = 0.56, Method: Composition-based stats. Identities = 26/97 (26%), Positives = 50/97 (51%), Gaps = 7/97 (7%) Query: 3 YDSREKEVFLESEVVHNIRLQIEEISAILSKKSRDTPNQEIRTKI-----YIITARIIAL 57 Y SR +SE +HN+ QI I+ L++ SR+ EIR ++ + + R I L Sbjct: 264 YASRYGASSADSEAIHNLEQQIASIAQHLAQPSRELA--EIRPRLDSIERSLHSNREIVL 321 Query: 58 IVFREGEKSLIFDLLRTNQKTNSSLTQAIIQEIDTLQ 94 RE +S++ +L+ K+ +++ Q + ++ L+ Sbjct: 322 DAAREATESVVARMLQHGPKSETAIAQQLAADMKALE 358 >gi|254710930|ref|ZP_05172741.1| Peptidoglycan-binding domain 1 protein [Brucella pinnipedialis B2/94] gi|256029312|ref|ZP_05442926.1| Peptidoglycan-binding domain 1 protein [Brucella pinnipedialis M292/94/1] gi|256157508|ref|ZP_05455426.1| Peptidoglycan-binding domain 1 protein [Brucella ceti M490/95/1] gi|256253515|ref|ZP_05459051.1| Peptidoglycan-binding domain 1 protein [Brucella ceti B1/94] gi|260167596|ref|ZP_05754407.1| putative peptidoglycan-binding protein [Brucella sp. F5/99] Length = 949 Score = 37.7 bits (86), Expect = 0.56, Method: Composition-based stats. Identities = 26/97 (26%), Positives = 50/97 (51%), Gaps = 7/97 (7%) Query: 3 YDSREKEVFLESEVVHNIRLQIEEISAILSKKSRDTPNQEIRTKI-----YIITARIIAL 57 Y SR +SE +HN+ QI I+ L++ SR+ EIR ++ + + R I L Sbjct: 264 YASRYGASSADSEAIHNLEQQIASIAQHLAQPSRELA--EIRPRLDSIERSLHSNREIVL 321 Query: 58 IVFREGEKSLIFDLLRTNQKTNSSLTQAIIQEIDTLQ 94 RE +S++ +L+ K+ +++ Q + ++ L+ Sbjct: 322 DAAREATESVVARMLQHGPKSETAIAQQLAADMKALE 358 >gi|225686585|ref|YP_002734557.1| peptidoglycan-binding domain 1 protein [Brucella melitensis ATCC 23457] gi|225642690|gb|ACO02603.1| Peptidoglycan-binding domain 1 protein [Brucella melitensis ATCC 23457] Length = 949 Score = 37.7 bits (86), Expect = 0.56, Method: Composition-based stats. Identities = 26/97 (26%), Positives = 50/97 (51%), Gaps = 7/97 (7%) Query: 3 YDSREKEVFLESEVVHNIRLQIEEISAILSKKSRDTPNQEIRTKI-----YIITARIIAL 57 Y SR +SE +HN+ QI I+ L++ SR+ EIR ++ + + R I L Sbjct: 264 YASRYGASSADSEAIHNLEQQIASIAQHLAQPSRELA--EIRPRLDSIERSLHSNREIVL 321 Query: 58 IVFREGEKSLIFDLLRTNQKTNSSLTQAIIQEIDTLQ 94 RE +S++ +L+ K+ +++ Q + ++ L+ Sbjct: 322 DAAREATESVVARMLQHGPKSETAIAQQLAADMKALE 358 >gi|225629289|ref|ZP_03787322.1| peptidoglycan-binding protein [Brucella ceti str. Cudo] gi|261220645|ref|ZP_05934926.1| peptidoglycan binding domain-containing protein [Brucella ceti B1/94] gi|261318512|ref|ZP_05957709.1| peptidoglycan-binding domain 1 protein [Brucella pinnipedialis B2/94] gi|261757018|ref|ZP_06000727.1| peptidoglycan-binding domain 1 protein [Brucella sp. F5/99] gi|265986312|ref|ZP_06098869.1| peptidoglycan-binding domain 1 protein [Brucella pinnipedialis M292/94/1] gi|265996006|ref|ZP_06108563.1| peptidoglycan-binding domain 1 protein [Brucella ceti M490/95/1] gi|225615785|gb|EEH12834.1| peptidoglycan-binding protein [Brucella ceti str. Cudo] gi|260919229|gb|EEX85882.1| peptidoglycan binding domain-containing protein [Brucella ceti B1/94] gi|261297735|gb|EEY01232.1| peptidoglycan-binding domain 1 protein [Brucella pinnipedialis B2/94] gi|261737002|gb|EEY24998.1| peptidoglycan-binding domain 1 protein [Brucella sp. F5/99] gi|262550303|gb|EEZ06464.1| peptidoglycan-binding domain 1 protein [Brucella ceti M490/95/1] gi|264658509|gb|EEZ28770.1| peptidoglycan-binding domain 1 protein [Brucella pinnipedialis M292/94/1] Length = 978 Score = 37.7 bits (86), Expect = 0.58, Method: Composition-based stats. Identities = 26/97 (26%), Positives = 50/97 (51%), Gaps = 7/97 (7%) Query: 3 YDSREKEVFLESEVVHNIRLQIEEISAILSKKSRDTPNQEIRTKI-----YIITARIIAL 57 Y SR +SE +HN+ QI I+ L++ SR+ EIR ++ + + R I L Sbjct: 293 YASRYGASSADSEAIHNLEQQIASIAQHLAQPSRELA--EIRPRLDSIERSLHSNREIVL 350 Query: 58 IVFREGEKSLIFDLLRTNQKTNSSLTQAIIQEIDTLQ 94 RE +S++ +L+ K+ +++ Q + ++ L+ Sbjct: 351 DAAREATESVVARMLQHGPKSETAIAQQLAADMKALE 387 >gi|256015586|ref|YP_003105595.1| putative peptidoglycan-binding protein [Brucella microti CCM 4915] gi|255998246|gb|ACU49933.1| putative peptidoglycan-binding protein [Brucella microti CCM 4915] Length = 978 Score = 37.7 bits (86), Expect = 0.59, Method: Composition-based stats. Identities = 26/97 (26%), Positives = 50/97 (51%), Gaps = 7/97 (7%) Query: 3 YDSREKEVFLESEVVHNIRLQIEEISAILSKKSRDTPNQEIRTKI-----YIITARIIAL 57 Y SR +SE +HN+ QI I+ L++ SR+ EIR ++ + + R I L Sbjct: 293 YASRYGASSADSEAIHNLEQQIASIAQHLAQPSRELA--EIRPRLDSIERSLHSNREIVL 350 Query: 58 IVFREGEKSLIFDLLRTNQKTNSSLTQAIIQEIDTLQ 94 RE +S++ +L+ K+ +++ Q + ++ L+ Sbjct: 351 DAAREATESVVARMLQHGPKSETAIAQQLAADMKALE 387 >gi|294853408|ref|ZP_06794080.1| peptidoglycan-binding protein [Brucella sp. NVSL 07-0026] gi|294819063|gb|EFG36063.1| peptidoglycan-binding protein [Brucella sp. NVSL 07-0026] Length = 978 Score = 37.7 bits (86), Expect = 0.60, Method: Composition-based stats. Identities = 26/97 (26%), Positives = 50/97 (51%), Gaps = 7/97 (7%) Query: 3 YDSREKEVFLESEVVHNIRLQIEEISAILSKKSRDTPNQEIRTKI-----YIITARIIAL 57 Y SR +SE +HN+ QI I+ L++ SR+ EIR ++ + + R I L Sbjct: 293 YASRYGASSADSEAIHNLEQQIASIAQHLAQPSRELA--EIRPRLDSIERSLHSNREIVL 350 Query: 58 IVFREGEKSLIFDLLRTNQKTNSSLTQAIIQEIDTLQ 94 RE +S++ +L+ K+ +++ Q + ++ L+ Sbjct: 351 DAAREATESVVARMLQHGPKSETAIAQQLAADMKALE 387 >gi|254695847|ref|ZP_05157675.1| peptidoglycan binding domain 1:Sel1-like repeat-containing protein [Brucella abortus bv. 3 str. Tulya] Length = 913 Score = 37.3 bits (85), Expect = 0.64, Method: Composition-based stats. Identities = 26/97 (26%), Positives = 50/97 (51%), Gaps = 7/97 (7%) Query: 3 YDSREKEVFLESEVVHNIRLQIEEISAILSKKSRDTPNQEIRTKI-----YIITARIIAL 57 Y SR +SE +HN+ QI I+ L++ SR+ EIR ++ + + R I L Sbjct: 264 YASRYGASSADSEAIHNLEQQIASIAQHLAQPSRELA--EIRPRLDSIERSLHSNREIVL 321 Query: 58 IVFREGEKSLIFDLLRTNQKTNSSLTQAIIQEIDTLQ 94 RE +S++ +L+ K+ +++ Q + ++ L+ Sbjct: 322 DAAREATESVVARMLQHGPKSETAIAQQLAADMKALE 358 >gi|261216267|ref|ZP_05930548.1| peptidoglycan-binding domain 1 protein [Brucella abortus bv. 3 str. Tulya] gi|260917874|gb|EEX84735.1| peptidoglycan-binding domain 1 protein [Brucella abortus bv. 3 str. Tulya] Length = 942 Score = 37.3 bits (85), Expect = 0.64, Method: Composition-based stats. Identities = 26/97 (26%), Positives = 50/97 (51%), Gaps = 7/97 (7%) Query: 3 YDSREKEVFLESEVVHNIRLQIEEISAILSKKSRDTPNQEIRTKI-----YIITARIIAL 57 Y SR +SE +HN+ QI I+ L++ SR+ EIR ++ + + R I L Sbjct: 293 YASRYGASSADSEAIHNLEQQIASIAQHLAQPSRELA--EIRPRLDSIERSLHSNREIVL 350 Query: 58 IVFREGEKSLIFDLLRTNQKTNSSLTQAIIQEIDTLQ 94 RE +S++ +L+ K+ +++ Q + ++ L+ Sbjct: 351 DAAREATESVVARMLQHGPKSETAIAQQLAADMKALE 387 >gi|256059001|ref|ZP_05449212.1| Peptidoglycan-binding domain 1 protein [Brucella neotomae 5K33] Length = 930 Score = 37.3 bits (85), Expect = 0.64, Method: Composition-based stats. Identities = 26/97 (26%), Positives = 50/97 (51%), Gaps = 7/97 (7%) Query: 3 YDSREKEVFLESEVVHNIRLQIEEISAILSKKSRDTPNQEIRTKI-----YIITARIIAL 57 Y SR +SE +HN+ QI I+ L++ SR+ EIR ++ + + R I L Sbjct: 264 YASRYGASSADSEAIHNLEQQIASIAQHLAQPSRELA--EIRPRLDSIERSLHSNREIVL 321 Query: 58 IVFREGEKSLIFDLLRTNQKTNSSLTQAIIQEIDTLQ 94 RE +S++ +L+ K+ +++ Q + ++ L+ Sbjct: 322 DAAREATESVVARMLQHGPKSETAIAQQLAADMKALE 358 >gi|254700036|ref|ZP_05161864.1| localization factor podJL [Brucella suis bv. 5 str. 513] Length = 913 Score = 37.3 bits (85), Expect = 0.64, Method: Composition-based stats. Identities = 26/97 (26%), Positives = 50/97 (51%), Gaps = 7/97 (7%) Query: 3 YDSREKEVFLESEVVHNIRLQIEEISAILSKKSRDTPNQEIRTKI-----YIITARIIAL 57 Y SR +SE +HN+ QI I+ L++ SR+ EIR ++ + + R I L Sbjct: 264 YASRYGASSADSEAIHNLEQQIASIAQHLAQPSRELA--EIRPRLDSIERSLHSNREIVL 321 Query: 58 IVFREGEKSLIFDLLRTNQKTNSSLTQAIIQEIDTLQ 94 RE +S++ +L+ K+ +++ Q + ++ L+ Sbjct: 322 DAAREATESVVARMLQHGPKSETAIAQQLAADMKALE 358 >gi|254690844|ref|ZP_05154098.1| Sel1-like repeat [Brucella abortus bv. 6 str. 870] Length = 864 Score = 37.3 bits (85), Expect = 0.64, Method: Composition-based stats. Identities = 26/97 (26%), Positives = 50/97 (51%), Gaps = 7/97 (7%) Query: 3 YDSREKEVFLESEVVHNIRLQIEEISAILSKKSRDTPNQEIRTKI-----YIITARIIAL 57 Y SR +SE +HN+ QI I+ L++ SR+ EIR ++ + + R I L Sbjct: 264 YASRYGASSADSEAIHNLEQQIASIAQHLAQPSRELA--EIRPRLDSIERSLHSNREIVL 321 Query: 58 IVFREGEKSLIFDLLRTNQKTNSSLTQAIIQEIDTLQ 94 RE +S++ +L+ K+ +++ Q + ++ L+ Sbjct: 322 DAAREATESVVARMLQHGPKSETAIAQQLAADMKALE 358 >gi|161620880|ref|YP_001594766.1| localization factor podJL [Brucella canis ATCC 23365] gi|254703156|ref|ZP_05164984.1| localization factor podJL [Brucella suis bv. 3 str. 686] gi|161337691|gb|ABX63995.1| Localization factor podJL [Brucella canis ATCC 23365] Length = 913 Score = 37.3 bits (85), Expect = 0.64, Method: Composition-based stats. Identities = 26/97 (26%), Positives = 50/97 (51%), Gaps = 7/97 (7%) Query: 3 YDSREKEVFLESEVVHNIRLQIEEISAILSKKSRDTPNQEIRTKI-----YIITARIIAL 57 Y SR +SE +HN+ QI I+ L++ SR+ EIR ++ + + R I L Sbjct: 264 YASRYGASSADSEAIHNLEQQIASIAQHLAQPSRELA--EIRPRLDSIERSLHSNREIVL 321 Query: 58 IVFREGEKSLIFDLLRTNQKTNSSLTQAIIQEIDTLQ 94 RE +S++ +L+ K+ +++ Q + ++ L+ Sbjct: 322 DAAREATESVVARMLQHGPKSETAIAQQLAADMKALE 358 >gi|23500552|ref|NP_699992.1| peptidoglycan-binding protein [Brucella suis 1330] gi|23464187|gb|AAN33997.1| peptidoglycan-binding protein, putative [Brucella suis 1330] Length = 913 Score = 37.3 bits (85), Expect = 0.64, Method: Composition-based stats. Identities = 26/97 (26%), Positives = 50/97 (51%), Gaps = 7/97 (7%) Query: 3 YDSREKEVFLESEVVHNIRLQIEEISAILSKKSRDTPNQEIRTKI-----YIITARIIAL 57 Y SR +SE +HN+ QI I+ L++ SR+ EIR ++ + + R I L Sbjct: 264 YASRYGASSADSEAIHNLEQQIASIAQHLAQPSRELA--EIRPRLDSIERSLHSNREIVL 321 Query: 58 IVFREGEKSLIFDLLRTNQKTNSSLTQAIIQEIDTLQ 94 RE +S++ +L+ K+ +++ Q + ++ L+ Sbjct: 322 DAAREATESVVARMLQHGPKSETAIAQQLAADMKALE 358 >gi|62317347|ref|YP_223200.1| peptidoglycan-binding protein [Brucella abortus bv. 1 str. 9-941] gi|83269325|ref|YP_418616.1| Sel1-like repeat-containing protein [Brucella melitensis biovar Abortus 2308] gi|254698625|ref|ZP_05160453.1| Sel1-like repeat [Brucella abortus bv. 2 str. 86/8/59] gi|254732072|ref|ZP_05190650.1| Sel1-like repeat [Brucella abortus bv. 4 str. 292] gi|256256027|ref|ZP_05461563.1| Sel1-like repeat [Brucella abortus bv. 9 str. C68] gi|62197540|gb|AAX75839.1| peptidoglycan-binding protein [Brucella abortus bv. 1 str. 9-941] gi|82939599|emb|CAJ12579.1| Putative peptidoglycan binding domain 1:Sel1-like repeat [Brucella melitensis biovar Abortus 2308] Length = 913 Score = 37.3 bits (85), Expect = 0.64, Method: Composition-based stats. Identities = 26/97 (26%), Positives = 50/97 (51%), Gaps = 7/97 (7%) Query: 3 YDSREKEVFLESEVVHNIRLQIEEISAILSKKSRDTPNQEIRTKI-----YIITARIIAL 57 Y SR +SE +HN+ QI I+ L++ SR+ EIR ++ + + R I L Sbjct: 264 YASRYGASSADSEAIHNLEQQIASIAQHLAQPSRELA--EIRPRLDSIERSLHSNREIVL 321 Query: 58 IVFREGEKSLIFDLLRTNQKTNSSLTQAIIQEIDTLQ 94 RE +S++ +L+ K+ +++ Q + ++ L+ Sbjct: 322 DAAREATESVVARMLQHGPKSETAIAQQLAADMKALE 358 >gi|261750518|ref|ZP_05994227.1| peptidoglycan-binding domain 1 protein [Brucella suis bv. 5 str. 513] gi|261740271|gb|EEY28197.1| peptidoglycan-binding domain 1 protein [Brucella suis bv. 5 str. 513] Length = 942 Score = 37.3 bits (85), Expect = 0.65, Method: Composition-based stats. Identities = 26/97 (26%), Positives = 50/97 (51%), Gaps = 7/97 (7%) Query: 3 YDSREKEVFLESEVVHNIRLQIEEISAILSKKSRDTPNQEIRTKI-----YIITARIIAL 57 Y SR +SE +HN+ QI I+ L++ SR+ EIR ++ + + R I L Sbjct: 293 YASRYGASSADSEAIHNLEQQIASIAQHLAQPSRELA--EIRPRLDSIERSLHSNREIVL 350 Query: 58 IVFREGEKSLIFDLLRTNQKTNSSLTQAIIQEIDTLQ 94 RE +S++ +L+ K+ +++ Q + ++ L+ Sbjct: 351 DAAREATESVVARMLQHGPKSETAIAQQLAADMKALE 387 >gi|261322945|ref|ZP_05962142.1| peptidoglycan binding domain-containing protein [Brucella neotomae 5K33] gi|261298925|gb|EEY02422.1| peptidoglycan binding domain-containing protein [Brucella neotomae 5K33] Length = 959 Score = 37.3 bits (85), Expect = 0.65, Method: Composition-based stats. Identities = 26/97 (26%), Positives = 50/97 (51%), Gaps = 7/97 (7%) Query: 3 YDSREKEVFLESEVVHNIRLQIEEISAILSKKSRDTPNQEIRTKI-----YIITARIIAL 57 Y SR +SE +HN+ QI I+ L++ SR+ EIR ++ + + R I L Sbjct: 293 YASRYGASSADSEAIHNLEQQIASIAQHLAQPSRELA--EIRPRLDSIERSLHSNREIVL 350 Query: 58 IVFREGEKSLIFDLLRTNQKTNSSLTQAIIQEIDTLQ 94 RE +S++ +L+ K+ +++ Q + ++ L+ Sbjct: 351 DAAREATESVVARMLQHGPKSETAIAQQLAADMKALE 387 >gi|260567915|ref|ZP_05838384.1| peptidoglycan-binding domain 1 protein [Brucella suis bv. 4 str. 40] gi|261753776|ref|ZP_05997485.1| peptidoglycan-binding domain 1 protein [Brucella suis bv. 3 str. 686] gi|260154580|gb|EEW89661.1| peptidoglycan-binding domain 1 protein [Brucella suis bv. 4 str. 40] gi|261743529|gb|EEY31455.1| peptidoglycan-binding domain 1 protein [Brucella suis bv. 3 str. 686] Length = 942 Score = 37.3 bits (85), Expect = 0.65, Method: Composition-based stats. Identities = 26/97 (26%), Positives = 50/97 (51%), Gaps = 7/97 (7%) Query: 3 YDSREKEVFLESEVVHNIRLQIEEISAILSKKSRDTPNQEIRTKI-----YIITARIIAL 57 Y SR +SE +HN+ QI I+ L++ SR+ EIR ++ + + R I L Sbjct: 293 YASRYGASSADSEAIHNLEQQIASIAQHLAQPSRELA--EIRPRLDSIERSLHSNREIVL 350 Query: 58 IVFREGEKSLIFDLLRTNQKTNSSLTQAIIQEIDTLQ 94 RE +S++ +L+ K+ +++ Q + ++ L+ Sbjct: 351 DAAREATESVVARMLQHGPKSETAIAQQLAADMKALE 387 >gi|260756423|ref|ZP_05868771.1| peptidoglycan-binding domain 1 protein [Brucella abortus bv. 6 str. 870] gi|260676531|gb|EEX63352.1| peptidoglycan-binding domain 1 protein [Brucella abortus bv. 6 str. 870] Length = 893 Score = 37.3 bits (85), Expect = 0.66, Method: Composition-based stats. Identities = 26/97 (26%), Positives = 50/97 (51%), Gaps = 7/97 (7%) Query: 3 YDSREKEVFLESEVVHNIRLQIEEISAILSKKSRDTPNQEIRTKI-----YIITARIIAL 57 Y SR +SE +HN+ QI I+ L++ SR+ EIR ++ + + R I L Sbjct: 293 YASRYGASSADSEAIHNLEQQIASIAQHLAQPSRELA--EIRPRLDSIERSLHSNREIVL 350 Query: 58 IVFREGEKSLIFDLLRTNQKTNSSLTQAIIQEIDTLQ 94 RE +S++ +L+ K+ +++ Q + ++ L+ Sbjct: 351 DAAREATESVVARMLQHGPKSETAIAQQLAADMKALE 387 >gi|189022598|ref|YP_001932339.1| Sel1-like repeat [Brucella abortus S19] gi|237816900|ref|ZP_04595892.1| Localization factor podJL [Brucella abortus str. 2308 A] gi|260544579|ref|ZP_05820400.1| peptidoglycan-binding domain 1 protein [Brucella abortus NCTC 8038] gi|260759855|ref|ZP_05872203.1| peptidoglycan-binding domain 1 protein [Brucella abortus bv. 4 str. 292] gi|260763094|ref|ZP_05875426.1| peptidoglycan-binding domain 1 protein [Brucella abortus bv. 2 str. 86/8/59] gi|260882246|ref|ZP_05893860.1| peptidoglycan binding domain-containing protein [Brucella abortus bv. 9 str. C68] gi|297249385|ref|ZP_06933086.1| TPR repeat-containing protein [Brucella abortus bv. 5 str. B3196] gi|189021172|gb|ACD73893.1| Sel1-like repeat [Brucella abortus S19] gi|237787713|gb|EEP61929.1| Localization factor podJL [Brucella abortus str. 2308 A] gi|260097850|gb|EEW81724.1| peptidoglycan-binding domain 1 protein [Brucella abortus NCTC 8038] gi|260670173|gb|EEX57113.1| peptidoglycan-binding domain 1 protein [Brucella abortus bv. 4 str. 292] gi|260673515|gb|EEX60336.1| peptidoglycan-binding domain 1 protein [Brucella abortus bv. 2 str. 86/8/59] gi|260871774|gb|EEX78843.1| peptidoglycan binding domain-containing protein [Brucella abortus bv. 9 str. C68] gi|297173254|gb|EFH32618.1| TPR repeat-containing protein [Brucella abortus bv. 5 str. B3196] Length = 942 Score = 37.3 bits (85), Expect = 0.66, Method: Composition-based stats. Identities = 26/97 (26%), Positives = 50/97 (51%), Gaps = 7/97 (7%) Query: 3 YDSREKEVFLESEVVHNIRLQIEEISAILSKKSRDTPNQEIRTKI-----YIITARIIAL 57 Y SR +SE +HN+ QI I+ L++ SR+ EIR ++ + + R I L Sbjct: 293 YASRYGASSADSEAIHNLEQQIASIAQHLAQPSRELA--EIRPRLDSIERSLHSNREIVL 350 Query: 58 IVFREGEKSLIFDLLRTNQKTNSSLTQAIIQEIDTLQ 94 RE +S++ +L+ K+ +++ Q + ++ L+ Sbjct: 351 DAAREATESVVARMLQHGPKSETAIAQQLAADMKALE 387 >gi|163844942|ref|YP_001622597.1| hypothetical protein BSUIS_B0814 [Brucella suis ATCC 23445] gi|163675665|gb|ABY39775.1| Hypothetical protein, conserved [Brucella suis ATCC 23445] Length = 913 Score = 37.3 bits (85), Expect = 0.66, Method: Composition-based stats. Identities = 26/97 (26%), Positives = 50/97 (51%), Gaps = 7/97 (7%) Query: 3 YDSREKEVFLESEVVHNIRLQIEEISAILSKKSRDTPNQEIRTKI-----YIITARIIAL 57 Y SR +SE +HN+ QI I+ L++ SR+ EIR ++ + + R I L Sbjct: 264 YASRYGASSADSEAIHNLEQQIASIAQHLAQPSRELA--EIRPRLDSIERSLHSNREIVL 321 Query: 58 IVFREGEKSLIFDLLRTNQKTNSSLTQAIIQEIDTLQ 94 RE +S++ +L+ K+ +++ Q + ++ L+ Sbjct: 322 DAAREATESVVARMLQHGPKSETAIAQQLAADMKALE 358 >gi|148558507|ref|YP_001257764.1| putative peptidoglycan-binding protein [Brucella ovis ATCC 25840] gi|148369792|gb|ABQ62664.1| putative peptidoglycan-binding protein [Brucella ovis ATCC 25840] Length = 978 Score = 37.3 bits (85), Expect = 0.79, Method: Composition-based stats. Identities = 26/97 (26%), Positives = 50/97 (51%), Gaps = 7/97 (7%) Query: 3 YDSREKEVFLESEVVHNIRLQIEEISAILSKKSRDTPNQEIRTKI-----YIITARIIAL 57 Y SR +SE +HN+ QI I+ L++ SR+ EIR ++ + + R I L Sbjct: 293 YASRYGASPADSEAIHNLEQQIASIAQHLAQPSRELA--EIRPRLDSIERSLHSNREIVL 350 Query: 58 IVFREGEKSLIFDLLRTNQKTNSSLTQAIIQEIDTLQ 94 RE +S++ +L+ K+ +++ Q + ++ L+ Sbjct: 351 DAAREATESVVARMLQHGPKSETAIAQQLAADMKALE 387 >gi|261313118|ref|ZP_05952315.1| peptidoglycan-binding protein [Brucella pinnipedialis M163/99/10] gi|261302144|gb|EEY05641.1| peptidoglycan-binding protein [Brucella pinnipedialis M163/99/10] Length = 580 Score = 36.5 bits (83), Expect = 1.1, Method: Composition-based stats. Identities = 26/97 (26%), Positives = 50/97 (51%), Gaps = 7/97 (7%) Query: 3 YDSREKEVFLESEVVHNIRLQIEEISAILSKKSRDTPNQEIRTKI-----YIITARIIAL 57 Y SR +SE +HN+ QI I+ L++ SR+ EIR ++ + + R I L Sbjct: 125 YASRYGASSADSEAIHNLEQQIASIAQHLAQPSRELA--EIRPRLDSIERSLHSNREIVL 182 Query: 58 IVFREGEKSLIFDLLRTNQKTNSSLTQAIIQEIDTLQ 94 RE +S++ +L+ K+ +++ Q + ++ L+ Sbjct: 183 DAAREATESVVARMLQHGPKSETAIAQQLAADMKALE 219 >gi|149186824|ref|ZP_01865134.1| putative signal transduction histidine kinase with GAF domain [Erythrobacter sp. SD-21] gi|148829491|gb|EDL47932.1| putative signal transduction histidine kinase with GAF domain [Erythrobacter sp. SD-21] Length = 208 Score = 35.4 bits (80), Expect = 3.0, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 32/56 (57%) Query: 7 EKEVFLESEVVHNIRLQIEEISAILSKKSRDTPNQEIRTKIYIITARIIALIVFRE 62 E+E L EV H ++ + IS+I++ K+R +P++ RT + I RI +L E Sbjct: 11 EREQTLRREVDHRVKNSLASISSIITMKARRSPDEGTRTALEDIGLRIRSLASLHE 66 Database: nr Posted date: May 22, 2011 12:22 AM Number of letters in database: 999,999,966 Number of sequences in database: 2,987,313 Database: /data/usr2/db/fasta/nr.01 Posted date: May 22, 2011 12:30 AM Number of letters in database: 999,999,796 Number of sequences in database: 2,903,041 Database: /data/usr2/db/fasta/nr.02 Posted date: May 22, 2011 12:36 AM Number of letters in database: 999,999,281 Number of sequences in database: 2,904,016 Database: /data/usr2/db/fasta/nr.03 Posted date: May 22, 2011 12:41 AM Number of letters in database: 999,999,960 Number of sequences in database: 2,935,328 Database: /data/usr2/db/fasta/nr.04 Posted date: May 22, 2011 12:46 AM Number of letters in database: 842,794,627 Number of sequences in database: 2,394,679 Lambda K H 0.316 0.140 0.350 Lambda K H 0.267 0.0425 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,478,192,457 Number of Sequences: 14124377 Number of extensions: 45635348 Number of successful extensions: 146102 Number of sequences better than 10.0: 45 Number of HSP's better than 10.0 without gapping: 19 Number of HSP's successfully gapped in prelim test: 83 Number of HSP's that attempted gapping in prelim test: 146083 Number of HSP's gapped (non-prelim): 102 length of query: 104 length of database: 4,842,793,630 effective HSP length: 73 effective length of query: 31 effective length of database: 3,811,714,109 effective search space: 118163137379 effective search space used: 118163137379 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.5 bits) S2: 76 (33.8 bits)