HHsearch alignment for GI: 254780891 and conserved domain: COG2172

>COG2172 RsbW Anti-sigma regulatory factor (Ser/Thr protein kinase) [Signal transduction mechanisms].

Probab=97.98  E-value=4.9e-05  Score=51.88  Aligned_cols=90  Identities=11%  Similarity=0.075  Sum_probs=61.3

Q ss_pred             HHHHHHHHHHHHHH----HHHCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHCCCCC--CCCCCCCHHHHHHHHHH
Q ss_conf             44456766468765----3200111112355772047999878984402458874054545--78998720499999999
Q gi|254780891|r  117 KILLNLFMVAHASL----PRGGKVTISVQDSKNENIFSLKINGNLARFPEKFTQIVDGNVE--STIDSHDIQFYYVILLA  190 (215)
Q Consensus       117 qvl~NLi~NA~~a~----~~gg~I~i~~~~~~~~~~i~V~D~G~Gi~~~e~~~~~~~~~~~--~~~~g~GlGl~~~~~i~  190 (215)
T Consensus        43 ~av~E~~~N~v~Ha~~~~~~~g~I~i~~~~~~~~~~i~i~D~G~~~~---~~~~~~~~~~~~~~~~~~~G~Gl~l~~~~~  119 (146)
T COG2172          43 IAVSEALTNAVKHAYKLDPSEGEIRIEVSLDDGKLEIRIWDQGPGIE---DLEESLGPGDTTAEGLQEGGLGLFLAKRLM  119 (146)
T ss_pred             HHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCEEEEEEEECCCCCC---CHHHHCCCCCCCCCCCCCCCCCHHHHHHHH
T ss_conf             99999998999976303899865999999709939999995798987---888853888888875324731378886211


Q ss_pred             HHCCCEEEEEEECCCC-EEEEEEE
Q ss_conf             9709879999877992-6999994
Q gi|254780891|r  191 HENKIRLLPEIIDDHN-VVLSALL  213 (215)
Q Consensus       191 ~~~gG~i~v~~~~~~g-~~f~~~l  213 (215)
T Consensus       120 ----D~~~~~~~~~~~~~~~~~~~  139 (146)
T COG2172         120 ----DEFSYERSEDGRNRLTKITL  139 (146)
T ss_pred             ----EEEEEEEECCCCEEEEEEEE
T ss_conf             ----07999960698558999996